PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056618.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 490aa MW: 55559.9 Da PI: 5.2044

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34	6.9e-11	439	486	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+t E++ l +v+++G g+Wk+I + + Rt+ ++k++w++ XP_028056618.1 439 RWSTLEEDTLRTGVQKFGRGNWKLILNSYRdifEERTEVDLKDKWRNM 486 9*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MDVDLSRWVL EFLLRQSIDD RVLNAVLQAL PLSNDDSSLN KAMLLRRIES EIATGSVSEK 60 VLEFLERIEE LDHEEGFTTS EAMKSAYCAV AVDCSVRFLE ESEEDKEGKY FDAVRRIWKG 120 RVWNMKRLDK VGLVSDELLG WKDEIEAAVW DASVCENVRM KKRGNAALEA VRLYVVEAWE 180 SMGPSFLELV AGTVSDDDSM REVIGLGNDR ICDQVGERGA SLLGSCPDSI VRNDNKEMQR 240 DVVLRRRKQV ANKRGAIAGT SRVVKITDTE ELDTRTSSKN YDCLPAREIN KVQEALRISS 300 LELQAVVKDP LPDALHLAEN LISSMGRENM NQETSARQNG LDLEAANPFL GKSAEAAPAN 360 EGNLDSQCCR NQNNVPKPSL MARNSTAHTY EWDDSVDDLP EESGDSRSRL HLSTPKRMVV 420 SPLKKHEIKK LARRRKIKRW STLEEDTLRT GVQKFGRGNW KLILNSYRDI FEERTEVDLK 480 DKWRNMIRVT

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MDVDLSRWVL EFLLRQSIDD RVLNAVLQAL PLSNDDSSLN KAMLLRRIES EIATGSVSEK  60
VLEFLERIEE LDHEEGFTTS EAMKSAYCAV AVDCSVRFLE ESEEDKEGKY FDAVRRIWKG  120
RVWNMKRLDK VGLVSDELLG WKDEIEAAVW DASVCENVRM KKRGNAALEA VRLYVVEAWE  180
SMGPSFLELV AGTVSDDDSM REVIGLGNDR ICDQVGERGA SLLGSCPDSI VRNDNKEMQR  240
DVVLRRRKQV ANKRGAIAGT SRVVKITDTE ELDTRTSSKN YDCLPAREIN KVQEALRISS  300
LELQAVVKDP LPDALHLAEN LISSMGRENM NQETSARQNG LDLEAANPFL GKSAEAAPAN  360
EGNLDSQCCR NQNNVPKPSL MARNSTAHTY EWDDSVDDLP EESGDSRSRL HLSTPKRMVV  420
SPLKKHEIKK LARRRKIKRW STLEEDTLRT GVQKFGRGNW KLILNSYRDI FEERTEVDLK  480
DKWRNMIRVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	3e-32	MYB_related family protein