PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056008.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 230aa    MW: 25562.9 Da    PI: 5.7746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-1076122554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RR ++N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  XP_028056008.1  76 KACREKLRRYKLNERFLELGSVLEHG---KPPKTDKAAILSDAVRMVTQL 122
                     678**********************9...99**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
METDCADNSN WLFDYGLIEG EDYTGALPAT TCFSWPSQAC DLGVEFDCSF GDSEGLIETG  60
SRKRLKSESC SASGSKACRE KLRRYKLNER FLELGSVLEH GKPPKTDKAA ILSDAVRMVT  120
QLRSEAQKLR ESNEDLHEKI KELKAEKNEL RDEKQRLKED KEKLEQQVKA MSAQPGFLPH  180
PSAVPAASQG QAAGNKLMPF IGYPGVAMWQ FIPSAVRDTS QDHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-92bHLH family protein