PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055946.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 347aa MW: 39005.9 Da PI: 8.2212

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.7	1.1e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ XP_028055946.1 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-SIIAEIDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTS 108 79**************************.89***********988899***********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_028055946.1 109 gGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 77788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MESTDSSTGL HHPNLPPGFR FHPTDEELVV HYLKKKAASA PLPVSIIAEI DLYKFDPWEL 60 PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTSGG TQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNKTSSR PPGCDPTHKK GSLRLDDWVL CRIYKKNNPP 180 RPLDQEREDS ITDILASSIP PSIPAAAQHH HQPKPPPMKP TNYATMLEND QSLFENIIVT 240 DTINNNNNNI GSKPQLPLMV TTTTSNTLPH LKRTLPSLYW NDDDDESEAA KRFQEDVSVV 300 VKNDDHNNSS IATLLSQLPQ TQQTVMGSLG EGVFRQQYQF TGLNWYS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MESTDSSTGL HHPNLPPGFR FHPTDEELVV HYLKKKAASA PLPVSIIAEI DLYKFDPWEL  60
PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTSGG TQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVDNKTSSR PPGCDPTHKK GSLRLDDWVL CRIYKKNNPP  180
RPLDQEREDS ITDILASSIP PSIPAAAQHH HQPKPPPMKP TNYATMLEND QSLFENIIVT  240
DTINNNNNNI GSKPQLPLMV TTTTSNTLPH LKRTLPSLYW NDDDDESEAA KRFQEDVSVV  300
VKNDDHNNSS IATLLSQLPQ TQQTVMGSLG EGVFRQQYQF TGLNWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-108	NAC family protein