PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055068.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 498aa    MW: 55596.2 Da    PI: 5.5118
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.82.5e-4191381127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp G+rF+Ptdeel++++L+ k++g++  + ++i+ vd++++ePwdLp +  +++++++w fF++++ ++++ kr nrat++gyWk tg+++ ++
  XP_028055068.1   9 LPIGYRFSPTDEELINHFLRSKINGDEEAV-RHIRVVDLCNLEPWDLPgMsLIETNDNKWIFFCPKNFEHRSRKRMNRATRAGYWKVTGRNRLIK 102
                     699************************877.88***************6347788999************************************9 PP

             NAM  94 sk.kgelvglkktLvfykgrapkg.ektdWvmheyr 127
                     s  +++++g kktLvfy+gr+ kg +kt+Wv+hey 
  XP_028055068.1 103 SVdGTSEIGEKKTLVFYTGRSGKGpKKTNWVIHEYC 138
                     9867778**********9988877369********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MEILPLNALP IGYRFSPTDE ELINHFLRSK INGDEEAVRH IRVVDLCNLE PWDLPGMSLI  60
ETNDNKWIFF CPKNFEHRSR KRMNRATRAG YWKVTGRNRL IKSVDGTSEI GEKKTLVFYT  120
GRSGKGPKKT NWVIHEYCAS SDVLDGTNPG QGSYVLFKLI KKKLDIMQSE STEGSNRTTL  180
DTSLPIEIRV ADNVGDKSIV QDKITEGSNG TTLDSPLPIE NCVADNAGDK SIFQPDLDPD  240
LLRHLVDPSL EPLDFLDKIQ SPSHSLNLLH VGPDPNGVLT EHLASVVAKD SGSYKNLAVE  300
SEPLNYINLN GWVSYFDTEV PRAQFDSQGS SSNSNVVSNV DTFGTGIKLR ARQPRDQTSS  360
KNFGSQGNAR RRNRLQKKLQ DPSLYQSNFT DLSYNEENHE AKAEGAEEEH SVTADPDAII  420
DETQDTSLSK SSDVTKVAQE LAWNMKSRSD FPRSGDEEVP SASLKAPPAL FFFFSSMHML  480
GVLFGRVVHC FCGFMEMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.28e-60NAC family protein