PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055032.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 606aa MW: 67581.8 Da PI: 5.262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.4	3.7e-46	9	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp G+rF+Ptde+l++++L+ k++g++ + ++i+evd++k+ePw+Lp + + ++++ew fF+++d k+++gkr+nr+tk+g+Wkatg+d++++ XP_028055032.1 9 LPIGYRFNPTDEQLIDHFLRSKITGNEDAV-RFIREVDLCKCEPWELPgMsLIPTNDDEWIFFCPKDPKNRKGKRSNRSTKKGFWKATGNDRPIK 102 699**********************888.99***********6346677899********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kk+Lvf++grapkg++t+Wv+hey + XP_028055032.1 103 SGnGTTKIGTKKSLVFHTGRAPKGKRTNWVIHEYCA 138 9856677*************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MEVLPLEALP IGYRFNPTDE QLIDHFLRSK ITGNEDAVRF IREVDLCKCE PWELPGMSLI 60 PTNDDEWIFF CPKDPKNRKG KRSNRSTKKG FWKATGNDRP IKSGNGTTKI GTKKSLVFHT 120 GRAPKGKRTN WVIHEYCATS KELDASNPGQ GSFFLFKLIK KHDNKLERNQ DESTEGLNCD 180 EVEENVSSPA TVVSFMPSEP VTPTVHAQVE NLLSSSKSCL AQNYESFHDS YVADDLEYDP 240 EVSRHLVDPE QPDSLAKIFS PLHSQMQPNL ESMHDLHWPF SNDVGDHGPT EQGSTEYFAS 300 VPSEAPLYNY LLQLVSNSDS DAEAAQEQVD PEQFEPNNER TANVFMATSV EAYRTPDIYI 360 SNDEQQSPEG SSSNSDSIGH GDTFGTGINL RTRQPRDQSS LKNFGPQGNA PRRIRLQQKL 420 QLPSFFYSKF TGLSFEEENH EAKLVAAKAE EAGEKLSATD DPAAVIDASL SKSNQEHLSD 480 QSCELFNSPQ GSSNAVSNGD TFGTGIKLKT CLTRNQPSSK SLRQQGNAPR KVFRLKKKLQ 540 VPSFYRSNFR DLSYKEQNHE AELVVAKAEE KESVSADPAA IVDEGQDTSL TKSNNVTKLL 600 KNRLGM

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MEVLPLEALP IGYRFNPTDE QLIDHFLRSK ITGNEDAVRF IREVDLCKCE PWELPGMSLI  60
PTNDDEWIFF CPKDPKNRKG KRSNRSTKKG FWKATGNDRP IKSGNGTTKI GTKKSLVFHT  120
GRAPKGKRTN WVIHEYCATS KELDASNPGQ GSFFLFKLIK KHDNKLERNQ DESTEGLNCD  180
EVEENVSSPA TVVSFMPSEP VTPTVHAQVE NLLSSSKSCL AQNYESFHDS YVADDLEYDP  240
EVSRHLVDPE QPDSLAKIFS PLHSQMQPNL ESMHDLHWPF SNDVGDHGPT EQGSTEYFAS  300
VPSEAPLYNY LLQLVSNSDS DAEAAQEQVD PEQFEPNNER TANVFMATSV EAYRTPDIYI  360
SNDEQQSPEG SSSNSDSIGH GDTFGTGINL RTRQPRDQSS LKNFGPQGNA PRRIRLQQKL  420
QLPSFFYSKF TGLSFEEENH EAKLVAAKAE EAGEKLSATD DPAAVIDASL SKSNQEHLSD  480
QSCELFNSPQ GSSNAVSNGD TFGTGIKLKT CLTRNQPSSK SLRQQGNAPR KVFRLKKKLQ  540
VPSFYRSNFR DLSYKEQNHE AELVVAKAEE KESVSADPAA IVDEGQDTSL TKSNNVTKLL  600
KNRLGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-74	NAC family protein