PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054803.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 512aa MW: 59910.9 Da PI: 7.1156

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.3	1.7e-25	58	147	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ +++++aetr+gC+a+l vk++ ++k++v++++++HnH+++ XP_028054803.1 58 DFYNAYGARMGFSIRREYCKKNKVTNQIISRNLVCNKEGFRKVDKRD-PLTKNPKAETRIGCEARLFVKLDVsTEKFVVIDFKEKHNHQFV 147 6*****************************************999.999****************99*************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MKTVAELEAR AMADLGEREK SRESRAKLCF DMDMEADNDC GWKPKEGMTF DSEEGVYDFY 60 NAYGARMGFS IRREYCKKNK VTNQIISRNL VCNKEGFRKV DKRDPLTKNP KAETRIGCEA 120 RLFVKLDVST EKFVVIDFKE KHNHQFVSLD CAHMLPSQRK ISPTQAIELD LASQSGLRLG 180 QSFELMGREA SGRQSLGFLK LDNEEQIMNM FWADAQMIMD YAQFGDVVTF DTTYKLNKEH 240 RPFASFVGFN HHRETVVFGA ALLYDETAKT FVWLFQTFLE AMSKNAPKTL FSDQDAAMAK 300 AIPIVMPDTS HRLCTWHLMQ NVLRHVNCLF QDKGVKGVLN KFLFDIEDEN EWKLKWGEML 360 DAYDAHDNHW LMLTFGVKEK WGWAYVKSTR AAGMSTTQLS EYFNAFLKDY IRSDFNLKEF 420 FMHFERVLSE KRYKELEAGS ILFPTLYSHV FELPIHDNYF FKSRQDFHAF FIDIILDHLQ 480 IMLHMWRDPP LKEVTTIRII VAYKIKAIWI IR

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MKTVAELEAR AMADLGEREK SRESRAKLCF DMDMEADNDC GWKPKEGMTF DSEEGVYDFY  60
NAYGARMGFS IRREYCKKNK VTNQIISRNL VCNKEGFRKV DKRDPLTKNP KAETRIGCEA  120
RLFVKLDVST EKFVVIDFKE KHNHQFVSLD CAHMLPSQRK ISPTQAIELD LASQSGLRLG  180
QSFELMGREA SGRQSLGFLK LDNEEQIMNM FWADAQMIMD YAQFGDVVTF DTTYKLNKEH  240
RPFASFVGFN HHRETVVFGA ALLYDETAKT FVWLFQTFLE AMSKNAPKTL FSDQDAAMAK  300
AIPIVMPDTS HRLCTWHLMQ NVLRHVNCLF QDKGVKGVLN KFLFDIEDEN EWKLKWGEML  360
DAYDAHDNHW LMLTFGVKEK WGWAYVKSTR AAGMSTTQLS EYFNAFLKDY IRSDFNLKEF  420
FMHFERVLSE KRYKELEAGS ILFPTLYSHV FELPIHDNYF FKSRQDFHAF FIDIILDHLQ  480
IMLHMWRDPP LKEVTTIRII VAYKIKAIWI IR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-76	FAR1 family protein