PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054504.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 269aa    MW: 29413.2 Da    PI: 6.3461
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.4e-09118162554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L +  +Y+k L
  XP_028054504.1 118 HSIAERLRRERIAERMRALQELVPSC-----NKTDRAAMLDEILDYVKFL 162
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MSTNPSESYT DDFLEQILAI PSYAAGFHQP FIPLGLSLDN GRDSVNGGGA FSGKSERESV  60
NMGSLFPVFE HLQPHSVRHS APQVFHGQPT HSTTMTLPHP PAIRPRVRAR RGQATDPHSI  120
AERLRRERIA ERMRALQELV PSCNKTDRAA MLDEILDYVK FLRLQVKVLS MSRLGGAGAV  180
AQLVADIPLS SIEGDNSEGG CNQQAWDKWS DHDIEQEVAK LMEEDVGAAM QYLRSKALCI  240
MPVSLAALIY PTHPPDASGS VKPEPNGPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-59bHLH family protein