PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053607.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 903aa MW: 98559.3 Da PI: 5.1199

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.3	7.1e-14	534	571	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +CnCkkskClk+YC+C aag +C+e+C+C++C+N+ XP_028053607.1 534 CIHCNCKKSKCLKLYCDCLAAGIYCDETCTCQECFNRL 571 679*********************************85 PP
2	TCR	46.9	5.3e-15	621	659	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C kkYCeC++a++ Cs C+Ce+CkN XP_028053607.1 621 RHKRGCNCKKSMCSKKYCECYQANVGCSTGCRCEGCKNV 659 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG 60 FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET 120 QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV 180 PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT 240 KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ 300 GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI 360 VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSEGRKL 420 ICQQPANTKS GSILRNVREK VSASSEDGSY ETQALAAITS LASQSSQIEK PSNDPALLKQ 480 GEYQTTPCDK GKSISKRADA VEELNRSSPK KKRKKAWTTN DDDDDDDDDD DYSCIHCNCK 540 KSKCLKLYCD CLAAGIYCDE TCTCQECFNR LDYEDTVQET RQQIESRNPL AFAPKIVQHV 600 TDSPANNNGE NGNNSTPSSA RHKRGCNCKK SMCSKKYCEC YQANVGCSTG CRCEGCKNVY 660 GRKEEYDMTK DALSKGPIHE SFENTFDEKL EMVSNQEGLL QTELCNPQNL MPLTPSFQFS 720 NHWKDVSKSQ FSTRRSLPSP ASNVTFLPPH GKSQRSPENS DSHGMLLKAR KHDEDVVSCY 780 QGLDYSNAET VDGFSLRCDE LAIGNDLSTL TNPPSTTIAS PLSSKLSDWT TISRSQSCPV 840 SGHLSSIGSD EKLPDTMEDN MTEILKDTST PLDALKVMSP PCIDSKDSTS QNVNDPEDCS 900 SKK

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG  60
FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET  120
QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV  180
PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT  240
KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ  300
GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI  360
VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSEGRKL  420
ICQQPANTKS GSILRNVREK VSASSEDGSY ETQALAAITS LASQSSQIEK PSNDPALLKQ  480
GEYQTTPCDK GKSISKRADA VEELNRSSPK KKRKKAWTTN DDDDDDDDDD DYSCIHCNCK  540
KSKCLKLYCD CLAAGIYCDE TCTCQECFNR LDYEDTVQET RQQIESRNPL AFAPKIVQHV  600
TDSPANNNGE NGNNSTPSSA RHKRGCNCKK SMCSKKYCEC YQANVGCSTG CRCEGCKNVY  660
GRKEEYDMTK DALSKGPIHE SFENTFDEKL EMVSNQEGLL QTELCNPQNL MPLTPSFQFS  720
NHWKDVSKSQ FSTRRSLPSP ASNVTFLPPH GKSQRSPENS DSHGMLLKAR KHDEDVVSCY  780
QGLDYSNAET VDGFSLRCDE LAIGNDLSTL TNPPSTTIAS PLSSKLSDWT TISRSQSCPV  840
SGHLSSIGSD EKLPDTMEDN MTEILKDTST PLDALKVMSP PCIDSKDSTS QNVNDPEDCS  900
SKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	510	543	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
2	511	544	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
3	511	515	KKRKK
4	512	543	KRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	6e-56	CPP family protein