PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053362.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 936aa MW: 101903 Da PI: 5.2243

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.3	7.4e-14	567	604	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +CnCkkskClk+YC+C aag +C+e+C+C++C+N+ XP_028053362.1 567 CIHCNCKKSKCLKLYCDCLAAGIYCDETCTCQECFNRL 604 679*********************************85 PP
2	TCR	46.9	5.5e-15	654	692	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C kkYCeC++a++ Cs C+Ce+CkN XP_028053362.1 654 RHKRGCNCKKSMCSKKYCECYQANVGCSTGCRCEGCKNV 692 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG 60 FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET 120 QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV 180 PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT 240 KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ 300 GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI 360 VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSGIGLH 420 LNSIINAMPI ACGAIGSMKS AEKGYMNVEG RKLICQQPAN TKSGSILRNV REKVSASSED 480 GSYETQALAA ITSLASQSSQ IEKPSNDPAL LKQGEYQTTP CDKGKSISKR ADAVEELNRS 540 SPKKKRKKAW TTNDDDDDDD DDDDYSCIHC NCKKSKCLKL YCDCLAAGIY CDETCTCQEC 600 FNRLDYEDTV QETRQQIESR NPLAFAPKIV QHVTDSPANN NGENGNNSTP SSARHKRGCN 660 CKKSMCSKKY CECYQANVGC STGCRCEGCK NVYGRKEEYD MTKDALSKGP IHESFENTFD 720 EKLEMVSNQE GLLQTELCNP QNLMPLTPSF QFSNHWKDVS KSQFSTRRSL PSPASNVTFL 780 PPHGKSQRSP ENSDSHGMLL KARKHDEDVV SCYQGLDYSN AETVDGFSLR CDELAIGNDL 840 STLTNPPSTT IASPLSSKLS DWTTISRSQS CPVSGHLSSI GSDEKLPDTM EDNMTEILKD 900 TSTPLDALKV MSPPCIDSKD STSQNVNDPE DCSSKK

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG  60
FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET  120
QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV  180
PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT  240
KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ  300
GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI  360
VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSGIGLH  420
LNSIINAMPI ACGAIGSMKS AEKGYMNVEG RKLICQQPAN TKSGSILRNV REKVSASSED  480
GSYETQALAA ITSLASQSSQ IEKPSNDPAL LKQGEYQTTP CDKGKSISKR ADAVEELNRS  540
SPKKKRKKAW TTNDDDDDDD DDDDYSCIHC NCKKSKCLKL YCDCLAAGIY CDETCTCQEC  600
FNRLDYEDTV QETRQQIESR NPLAFAPKIV QHVTDSPANN NGENGNNSTP SSARHKRGCN  660
CKKSMCSKKY CECYQANVGC STGCRCEGCK NVYGRKEEYD MTKDALSKGP IHESFENTFD  720
EKLEMVSNQE GLLQTELCNP QNLMPLTPSF QFSNHWKDVS KSQFSTRRSL PSPASNVTFL  780
PPHGKSQRSP ENSDSHGMLL KARKHDEDVV SCYQGLDYSN AETVDGFSLR CDELAIGNDL  840
STLTNPPSTT IASPLSSKLS DWTTISRSQS CPVSGHLSSI GSDEKLPDTM EDNMTEILKD  900
TSTPLDALKV MSPPCIDSKD STSQNVNDPE DCSSKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	543	576	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
2	544	577	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
3	544	548	KKRKK
4	545	576	KRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-55	CPP family protein