PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052974.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 681aa MW: 78161 Da PI: 5.8017

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	43.2	7.5e-14	498	537	5	44
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 isledl++ F +++kd+A +Lgv+ +++Kr+CR+y+I W XP_028052974.1 498 ISLEDLQQRFGMKLKDVAESLGVSRSTVKRACREYNITWW 537 89***********************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MAENEHSLRT EYLTDGDGIR DFPPDFKSYV KNTQLLCQRT AFNWGWVFWS GEDDPRERLP 60 PPPAFSELMA RIKSCFKDVI MDLLPTTQCL LQFWKVIEIG GKCLLTTRYQ PFGFNQINEG 120 LCGYRLISLD YEFDVDGVSD EHLGLLGRVF RHQQLESTPN VQYYSCNEYP QRDRAIICNI 180 KSSLVVPLFG FSRRCCIGVF EMVSTTEIIN SHLGSFFYRY TLSLLQIKGL PSSKCEHLNC 240 EKVKDETPEE IRKMLDVVYS THHLPFAQTW SLCRLCNAVF KTYRTCHREG HMDDFLAVCA 300 LQQLRRGKGI VGRAISSQNL VFCKDVTQFS ITEYPFAHYT RKFGFTGSFA ICLRSSYIED 360 NVYTLEFFLP PNYTEGRDLR TALVPLLTTM KQHCKSFKVA SGEELGEELS IEVLDFSEDG 420 ELYSYQIPQT ARSPNRMENG EQMDLDLFDQ QLPEVDVVDT ENNVVSNAEE NNIVVTSVQQ 480 NCIINLSQRL QRKAGIPISL EDLQQRFGMK LKDVAESLGV SRSTVKRACR EYNITWWSPG 540 KRSKDNQLLS NKGVVQEQIL ESSHPPFFDP LHMQDMATAS RTKPHFPTAQ DTSIVTIKAK 600 YGDDFIKFQL PVLSGMVEFQ QQVAKRLNLQ GGTYRVKYQD EVNDWILVVC DEDLQNYICN 660 SISRERNTVT MLIQPITNCP S

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MAENEHSLRT EYLTDGDGIR DFPPDFKSYV KNTQLLCQRT AFNWGWVFWS GEDDPRERLP  60
PPPAFSELMA RIKSCFKDVI MDLLPTTQCL LQFWKVIEIG GKCLLTTRYQ PFGFNQINEG  120
LCGYRLISLD YEFDVDGVSD EHLGLLGRVF RHQQLESTPN VQYYSCNEYP QRDRAIICNI  180
KSSLVVPLFG FSRRCCIGVF EMVSTTEIIN SHLGSFFYRY TLSLLQIKGL PSSKCEHLNC  240
EKVKDETPEE IRKMLDVVYS THHLPFAQTW SLCRLCNAVF KTYRTCHREG HMDDFLAVCA  300
LQQLRRGKGI VGRAISSQNL VFCKDVTQFS ITEYPFAHYT RKFGFTGSFA ICLRSSYIED  360
NVYTLEFFLP PNYTEGRDLR TALVPLLTTM KQHCKSFKVA SGEELGEELS IEVLDFSEDG  420
ELYSYQIPQT ARSPNRMENG EQMDLDLFDQ QLPEVDVVDT ENNVVSNAEE NNIVVTSVQQ  480
NCIINLSQRL QRKAGIPISL EDLQQRFGMK LKDVAESLGV SRSTVKRACR EYNITWWSPG  540
KRSKDNQLLS NKGVVQEQIL ESSHPPFFDP LHMQDMATAS RTKPHFPTAQ DTSIVTIKAK  600
YGDDFIKFQL PVLSGMVEFQ QQVAKRLNLQ GGTYRVKYQD EVNDWILVVC DEDLQNYICN  660
SISRERNTVT MLIQPITNCP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-77	Nin-like family protein