PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028052399.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 507aa MW: 58920.6 Da PI: 5.9444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028052399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.4	2e-12	53	101	1	48
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.t 48 +fYn+Y +vGFs++k++ +k+++++eit+rtfvC+keg+ +k++ XP_028052399.1 53 DFYNTYEGKVGFSIKKAYANKNRQTKEITSRTFVCYKEGSWGIDKRDpL 101 6**************************************9888877742 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MEEQRDGESG GDAMAGRPHC RDIEVMVENN IVDDCGWKPK VGMPFDSEQA AYDFYNTYEG 60 KVGFSIKKAY ANKNRQTKEI TSRTFVCYKE GSWGIDKRDP LVKKSKTRDC IHMLPSQRKI 120 STTQAIEVEL ASQSGIPLRS AYELFGRESG GRASLGFTKL DQKNYLRSKR QKDLEYGETG 180 SVLHYFRKKT VKNPSFFYAV QLDCDEQISN IFWANAQMIM DYAQFGDVVT FDTTYKLNNE 240 HRPFGSFVGF NHHRETVIFG AALMYDETAE SFTWLFQIFL EAMSNKAPKT IFTDQDAAMA 300 KAIPIVMPDT NHRLCTWHLM QNAVNYVTSV FDDVGVKAVF SKFMHDIDDD EEFRIQWDQM 360 LDKYDAFDNH WLEQTFHVKE KWGWPYIMNS WAAGMSTTQL SESFNTFLKD YLNCDHNLME 420 FFKHFERVLY EKRYKELEAE YNLSQKLPRV SIPTVMLKQV AEIYTKTIFE EFQNEYVQSI 480 EASIIGTTND GESTKFTIRT MVDGKKR

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MEEQRDGESG GDAMAGRPHC RDIEVMVENN IVDDCGWKPK VGMPFDSEQA AYDFYNTYEG  60
KVGFSIKKAY ANKNRQTKEI TSRTFVCYKE GSWGIDKRDP LVKKSKTRDC IHMLPSQRKI  120
STTQAIEVEL ASQSGIPLRS AYELFGRESG GRASLGFTKL DQKNYLRSKR QKDLEYGETG  180
SVLHYFRKKT VKNPSFFYAV QLDCDEQISN IFWANAQMIM DYAQFGDVVT FDTTYKLNNE  240
HRPFGSFVGF NHHRETVIFG AALMYDETAE SFTWLFQIFL EAMSNKAPKT IFTDQDAAMA  300
KAIPIVMPDT NHRLCTWHLM QNAVNYVTSV FDDVGVKAVF SKFMHDIDDD EEFRIQWDQM  360
LDKYDAFDNH WLEQTFHVKE KWGWPYIMNS WAAGMSTTQL SESFNTFLKD YLNCDHNLME  420
FFKHFERVLY EKRYKELEAE YNLSQKLPRV SIPTVMLKQV AEIYTKTIFE EFQNEYVQSI  480
EASIIGTTND GESTKFTIRT MVDGKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-96	FAR1 family protein