PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028052216.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 276aa    MW: 30371.1 Da    PI: 5.5679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028052216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.6e-052302355
                    HHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 23 LrellPkaskapskKlsKaeiLekAveYIksLq 55
                    Lr l+P++    ++K + a+ L +++eY+++Lq
  XP_028052216.1  2 LRNLIPHS----DQKRDTASFLLEVIEYVQYLQ 30
                    9******9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MLRNLIPHSD QKRDTASFLL EVIEYVQYLQ EKVQKYEGSY QGLNSEPTKL MPWRNSHWRI  60
QSFVGHTQAI KNDSGPCSTF PGRFDENNIT TSISPVIHPI PNPHNPIESD NPSRDPDGKP  120
VEQQPVLPSK SIIMPPMPMP LQASVPASVQ GDDVIPHPLQ RPISDARSTE CPIMSDALSQ  180
QEELMIEGGT ISITSIYSQG LLNNLTQALQ SAGVDLSQAT ASVQIELGKR ANRGVTSGVP  240
IAKDPENTPS SHQPFGHFRD ASNGEDLDQA QKRLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-73bHLH family protein