PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051713.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 324aa    MW: 36160.1 Da    PI: 9.8487
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind375.58.9e-11513241301
       GAGA_bind   1 mdddgsre..rnkgyye....pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd+g+re  r+k+       ++ +s+k     q+m+++aerd++i+ernla+sekkaa+aerdma lqrd+a+aern a++erdn++++l+++e
  XP_028051713.1   1 MDDSGHREngRHKPLPGqwlmQHqPSMK-----QIMAIMAERDSAIQERNLAVSEKKAALAERDMAILQRDSAMAERNSAIMERDNAIATLQYRE 90 
                     9999998878888743322223334555.....************************************************************** PP

       GAGA_bind  89 nsla....salpvgvqvlsgtksidslqq..lsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     n+++    s +p+g+q+++g+k++++ qq  +++p++++ ++  r++++++ l ++  a+e    +   k++++k++ke ka++ ++k++ks kk
  XP_028051713.1  91 NAMTsssmSPCPPGCQISRGVKHLHHPQQhmHHHPHMSEAQYISRDMHTSDGLSMSPVASE---PA---KSRQTKRTKEAKATASNRKPSKSLKK 179
                     *9988888889***************99964556********9999998887765443332...22...23345556666666666666667777 PP

       GAGA_bind 178 vkkesader......................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkr 250
                     vk+e++d +                      sk ++k++dl+ln+v++D+s +PvPvCsCtG+lr CYkWGnGGWqS+CCttt+S+yPLP+++++
  XP_028051713.1 180 VKREGEDLNkmmfgrqdtgsggddldkqlgmSKPDWKDQDLGLNQVAFDDS-MPVPVCSCTGILRPCYKWGNGGWQSSCCTTTMSMYPLPAVPNK 273
                     77777663347777778899*****************************97.9****************************************** PP

       GAGA_bind 251 rgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     r+aR++grKmS++af+kl+++LaaeG+dls+pvDLkdhWAkHGtn+++ti+
  XP_028051713.1 274 RHARVGGRKMSGSAFNKLISRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 324
                     **************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDDSGHRENG RHKPLPGQWL MQHQPSMKQI MAIMAERDSA IQERNLAVSE KKAALAERDM  60
AILQRDSAMA ERNSAIMERD NAIATLQYRE NAMTSSSMSP CPPGCQISRG VKHLHHPQQH  120
MHHHPHMSEA QYISRDMHTS DGLSMSPVAS EPAKSRQTKR TKEAKATASN RKPSKSLKKV  180
KREGEDLNKM MFGRQDTGSG GDDLDKQLGM SKPDWKDQDL GLNQVAFDDS MPVPVCSCTG  240
ILRPCYKWGN GGWQSSCCTT TMSMYPLPAV PNKRHARVGG RKMSGSAFNK LISRLAAEGH  300
DLSHPVDLKD HWAKHGTNRY ITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-151BBR-BPC family protein