PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051614.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 801aa MW: 91202.6 Da PI: 8.8856

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.5e-17	37	122	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+vGFs+ +++ ++ge Cs++gkr ++++ + +++ +t+++Cka+++ +++kdg++++t+++leHnH+l XP_028051614.1 37 FYAKYAKHVGFSIACKTQVIG-DDGELRYFGIECSRSGKRIKKSEV--NPLKPSLSTKIDCKARVRASLQKDGRFMLTTVNLEHNHDLI 122 9***********9988776.8999**********998766..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MEIDSNTVEN PLLNESEEVE EPKRGMCFTS KQEAYTFYAK YAKHVGFSIA CKTQVIGDDG 60 ELRYFGIECS RSGKRIKKSE VNPLKPSLST KIDCKARVRA SLQKDGRFML TTVNLEHNHD 120 LIPTDSRHFL MNKKILSPVK RRLEINDQAG IGVSRNYNSM VVEAGGYESL TFDERDARNY 180 IERARKLRLG EGDSDALQKY FLRMHAQNSS FYYMIDVDID FRIRNLFWAD AMSRAAYEEF 240 GDVVSFDTTY LTNKYDIPFA PFVRVNHHGQ SILLGCGLLS SEDTDTFVWL FKSWLNCMSD 300 HPPKAIITDQ CKAMQKAIEI VFPNTRHRWC LWHIMKKIPE KLKGYSQYES MKMDLQNAVY 360 DTFTKDEFEM KWKEMIAKFN LDENQWLGVL YDERHRWVPV EKEKKADFKS RHKVFDCLTV 420 YGFEKQFQDA YTNAKFKEVQ AEMKRLVYCQ SFLVKEEGSI CTYFVKEAVV VFGKMKHVDF 480 VVYSNSTEFD VQCMCRLFEF RGIMCAHSLV VLIARCINEV PNKYILPRWR KNLDRGYTCI 540 KTTYTGFGDD FNAKVYDKMN RKLIGIIQFA GNSEGKIKLI DCGLDEIKAK VMKDDEGGGS 600 NVAPSTSNVP PITSNVSSSP IGSINRKAIS HTKLLSPLVA RRKGRPVTKR KVAKVDQIVN 660 RLKASKRKHN KSKGTKVIGG EGEGQCQSQP ECSARRELYP YMVGMENSMC VPGHMVNAIG 720 GTSLTPASVD IMRGQSFMNA PTQIYGVGTS PTPSDCIGGT PGFMTTQQSM IATHQIYGAV 780 PSSFVDLNVQ MDRNDHGGSF R

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MEIDSNTVEN PLLNESEEVE EPKRGMCFTS KQEAYTFYAK YAKHVGFSIA CKTQVIGDDG  60
ELRYFGIECS RSGKRIKKSE VNPLKPSLST KIDCKARVRA SLQKDGRFML TTVNLEHNHD  120
LIPTDSRHFL MNKKILSPVK RRLEINDQAG IGVSRNYNSM VVEAGGYESL TFDERDARNY  180
IERARKLRLG EGDSDALQKY FLRMHAQNSS FYYMIDVDID FRIRNLFWAD AMSRAAYEEF  240
GDVVSFDTTY LTNKYDIPFA PFVRVNHHGQ SILLGCGLLS SEDTDTFVWL FKSWLNCMSD  300
HPPKAIITDQ CKAMQKAIEI VFPNTRHRWC LWHIMKKIPE KLKGYSQYES MKMDLQNAVY  360
DTFTKDEFEM KWKEMIAKFN LDENQWLGVL YDERHRWVPV EKEKKADFKS RHKVFDCLTV  420
YGFEKQFQDA YTNAKFKEVQ AEMKRLVYCQ SFLVKEEGSI CTYFVKEAVV VFGKMKHVDF  480
VVYSNSTEFD VQCMCRLFEF RGIMCAHSLV VLIARCINEV PNKYILPRWR KNLDRGYTCI  540
KTTYTGFGDD FNAKVYDKMN RKLIGIIQFA GNSEGKIKLI DCGLDEIKAK VMKDDEGGGS  600
NVAPSTSNVP PITSNVSSSP IGSINRKAIS HTKLLSPLVA RRKGRPVTKR KVAKVDQIVN  660
RLKASKRKHN KSKGTKVIGG EGEGQCQSQP ECSARRELYP YMVGMENSMC VPGHMVNAIG  720
GTSLTPASVD IMRGQSFMNA PTQIYGVGTS PTPSDCIGGT PGFMTTQQSM IATHQIYGAV  780
PSSFVDLNVQ MDRNDHGGSF R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	645	655	RPVTKRKVAKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-103	FAR1 family protein