PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051557.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 254aa MW: 26446.8 Da PI: 10.3875

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.1	1.6e-38	32	121	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...k 89 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ + s+ ++snss++ + XP_028051557.1 32 VKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRNSSNSSISaalD 121 79******************************************************************8885555555555555553331 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MSTSDGAANG VINGAIIEQQ RLQPPGNGAL SVKKPPAKDR HSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS FSTVSVSVRN SSNSSISAAL 120 DQKPSQPLIT PTPFILGKRL RSDDDSVDGG GKDDVAAAAA VVGPAGGFWA LPARPDFGQV 180 WSFAAAPPEM VVPSPAMASQ ASFSGRFLQQ QPMGEASAAR VGNYLPIAQG HLNLLASLSG 240 APSGSSGRRE DDQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-63	TCP family protein