PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368797.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 408aa    MW: 45040.2 Da    PI: 6.8148
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS392.44.9e-120443981374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cA+ ++ g+l+la +lL +++ +     +++ + ++a++f   L  r++          pp ++ +  +++ +  ++ f+e+sP+lkf
  XP_027368797.1  44 LVHMLISCAHSLQRGNLSLAASLLHTMQSIfqHLTTASGIGKVASHFIHSLTLRIYA---------PPHSQIH-YHQNDAVLYHHFYEASPYLKF 128
                     689**************************9644455589*****************9.........4444432.35556678899********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIl+a+  ++++H+iDf +++GlQWp+L++aLa Rp+ ppslR+T+v++     +   +e+g rLa++A++++++f+f+v++a+rled
  XP_027368797.1 129 AHFTANQAILQAFTDHNCLHVIDFHLMHGLQWPPLIHALAIRPGAPPSLRLTAVAP----PSSDHREIGFRLADVARSVNLRFSFRVVAASRLED 219
                     ********************************************************....77999****************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L+v+p+Ea+aVn+v+qlhr+l +++s    +d+vL+ +++++P+v++vveqea+hn++ Flerf+eal yysa+fdsl+a      e ++
  XP_027368797.1 220 VNTSMLQVNPKEAVAVNSVMQLHRVLGSEHS----IDAVLDWIRKMNPRVMTVVEQEANHNQNGFLERFTEALCYYSAVFDSLQAC---PVEPDK 307
                     **************************55555....556*********************************************888...468888 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ +++++rei+nv++ceg +r erhe l+kW++rl++aGF+ v+l ++a kqa++ll+ ++ +gy+vee++g+l+l+W++rpL+++SaWr
  XP_027368797.1 308 SLGEMYVQREICNVLCCEGPARLERHEPLAKWKARLGKAGFEGVHLASNALKQASMLLSLFSAEGYSVEENEGCLTLCWHNRPLIAASAWR 398
                     99999*************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MASGEDSNIT ASASLRNGVG ASSSSSSSAS ELNLTEEEES GIRLVHMLIS CAHSLQRGNL  60
SLAASLLHTM QSIFQHLTTA SGIGKVASHF IHSLTLRIYA PPHSQIHYHQ NDAVLYHHFY  120
EASPYLKFAH FTANQAILQA FTDHNCLHVI DFHLMHGLQW PPLIHALAIR PGAPPSLRLT  180
AVAPPSSDHR EIGFRLADVA RSVNLRFSFR VVAASRLEDV NTSMLQVNPK EAVAVNSVMQ  240
LHRVLGSEHS IDAVLDWIRK MNPRVMTVVE QEANHNQNGF LERFTEALCY YSAVFDSLQA  300
CPVEPDKSLG EMYVQREICN VLCCEGPARL ERHEPLAKWK ARLGKAGFEG VHLASNALKQ  360
ASMLLSLFSA EGYSVEENEG CLTLCWHNRP LIAASAWRAV QLAHSDCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-129GRAS family protein