PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 677aa MW: 74498.8 Da PI: 5.5434 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.6 | 5.9e-28 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+W+ eLH++Fv av+qL G++kA Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_027368781.1 208 KPRLVWAAELHSKFVAAVNQL-GIDKAFPKRILDLMNVEGLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.3 | 3.2e-12 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ W +e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_027368781.1 210 RLVWAAELHSKFVAAVNQLGIDkaFPKRILDLMNvEGLTRENVASHLQKYR 260 789***********************************************7 PP | |||||||
3 | Response_reg | 79 | 1.6e-26 | 23 | 131 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+++ +++l+++l++ +y +v++++++ +ale+l++++ +Dl++ D++mp+mdG++ll+ e++lp+i+++++g++e + + + G XP_027368781.1 23 VLAVDDDRTCLKVLENLLRQCKY-NVTTTTQSIKALEILRKNRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSGYGDKERVMKGVMHG 115 799********************.***************998889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +eel + XP_027368781.1 116 ACDYLMKPVRIEELQN 131 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 677 aa Download sequence |
MMVGNGLVND DVAGDRFPVG MRVLAVDDDR TCLKVLENLL RQCKYNVTTT TQSIKALEIL 60 RKNRNKFDLV ISDVNMPDMD GFKLLELVGL EMDLPVIMLS GYGDKERVMK GVMHGACDYL 120 MKPVRIEELQ NIWQHVVRRK IDCKDKTKFV NEEKACNMAR EGSQAIASEN NADQNKKLSL 180 KRKEHSEVEV EVEEDDDQEN EEPLNQKKPR LVWAAELHSK FVAAVNQLGI DKAFPKRILD 240 LMNVEGLTRE NVASHLQKYR LSLKKPTQQA NMVVALGSSD PYLQMGSLEG YVDFCTSSRS 300 GRMLSTTLPS YASGGMFHRL NTPSGLNMRG LTSSALVRPV RSQNINSSSV ETLGNMQQSM 360 FSAKQTSNLL QAIPTSIEVN QFQQNNCTTG IRKSSPIDGS SGFTTVSCGF SDSRTNVSNA 420 NNSLPGLSNN HLLLQGNSQS THNSKAFRNH SSLGAASVNT QSFDPGICSS SKFSVNASTV 480 SEVFNNDQLP QNNLNFSSST FHSGNSPVDF SSTSAIDVPL EDARGKLQYQ EGLLGNILMA 540 SCYTQHQSWE ADKVVSNKDT TSTINSLVSP NGDTMSLGHS LGQNNIVCSK RIDAPFVGQL 600 NGVNPSITQS IEEEKLYSMK SNDASDLQQM KSQEGLIQNS FGSLDDIMSE IVKLDQNAMM 660 LIDAEMEFDA YPVGSCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-116 | ARR-B family protein |