PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368755.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

FAR1

Protein Properties

Length: 758aa MW: 86777.7 Da PI: 6.8492

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.8	2.4e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel XP_027368755.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFRNIHNHELL 152 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MSEGTSLVLE SSENGTDLSQ DDIGTIEETP EETILSRQTS VNLVPFIGQR FVSQEAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QIKPSDDGKV QRNRKSSRCG 120 CQAYMRIVKR ADFDVPEWRV TGFRNIHNHE LLKSNEVRLL PSYCPISPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGIKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLIA MCKRLKDENH 240 NFKYEFKIDS NNRLEHIAWS YSSSIQSYEA FGDAVVFDTT YRVDAYDMLL GIWLGVDNNG 300 MTCFFSCALL RDENMQSFSW ALKAFLGFMK GKAPQTILTD HNMWLKEAIA VEMPETKHGF 360 CVWHILSKFS DWFSLLLGSQ YDEWKAEFHR LYNLELVEDF EEGWRQMVDK YGLHANKHII 420 SLYSLKTFWS LPFLRRYFFA GLTSTCQSES INVFIQRFLS AQSQLDRFVE QVADVVDFND 480 RAGAKQKMQR KLQKVCLKTG SPIESHAATV LTPYALSKLQ EELVLAPQYA SFLVDEGCFQ 540 VRHHSQTDGG CKVLWVPCQE HISCSCHLFE FSGILCRHVL RVLSTNNCFH IPDQYLPARW 600 RGINSFSVNH FRGTTSRDQP ERIQFLESMV STLIMESIET EERLDVACEQ ISLALSRIKT 660 LPRSTHGVND IAYSYPSDSL ILPEVEDTDG MIHGFTIANP HDSISLGKLK ERRVRDGIDL 720 TRKRRQFSAP LCTQYGHDAS DCSIMAGDNM SGDALGYL

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MSEGTSLVLE SSENGTDLSQ DDIGTIEETP EETILSRQTS VNLVPFIGQR FVSQEAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QIKPSDDGKV QRNRKSSRCG  120
CQAYMRIVKR ADFDVPEWRV TGFRNIHNHE LLKSNEVRLL PSYCPISPDD KSRICMFAKA  180
GMSVRQMLRL MELEKGIKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLIA MCKRLKDENH  240
NFKYEFKIDS NNRLEHIAWS YSSSIQSYEA FGDAVVFDTT YRVDAYDMLL GIWLGVDNNG  300
MTCFFSCALL RDENMQSFSW ALKAFLGFMK GKAPQTILTD HNMWLKEAIA VEMPETKHGF  360
CVWHILSKFS DWFSLLLGSQ YDEWKAEFHR LYNLELVEDF EEGWRQMVDK YGLHANKHII  420
SLYSLKTFWS LPFLRRYFFA GLTSTCQSES INVFIQRFLS AQSQLDRFVE QVADVVDFND  480
RAGAKQKMQR KLQKVCLKTG SPIESHAATV LTPYALSKLQ EELVLAPQYA SFLVDEGCFQ  540
VRHHSQTDGG CKVLWVPCQE HISCSCHLFE FSGILCRHVL RVLSTNNCFH IPDQYLPARW  600
RGINSFSVNH FRGTTSRDQP ERIQFLESMV STLIMESIET EERLDVACEQ ISLALSRIKT  660
LPRSTHGVND IAYSYPSDSL ILPEVEDTDG MIHGFTIANP HDSISLGKLK ERRVRDGIDL  720
TRKRRQFSAP LCTQYGHDAS DCSIMAGDNM SGDALGYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	721	726	TRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein