PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368633.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 221aa    MW: 24354.2 Da    PI: 8.3721
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.0009105127123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C+k+F +++ L  H  +H
  XP_027368633.1 105 FECSNCNKVFGSHHALGGHRASH 127
                     89**************9999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MSDSGSGYGE ASSSVWGKKR KKTEEWKGKR TEPCACTECG KKFWSWKALF GHMRCHPERE  60
WRGINPPPNL KRQRGITEEE REVAQCLLLL ANGNANANAI DDPHFECSNC NKVFGSHHAL  120
GGHRASHKNV KGCFANAVTT HDDNNTNTNT NNNNMIIGFG NSISAPHKCS ICLRVFSTGQ  180
ALGGHKRCHW EKGDTVSVSP NSVDLNFPPP DDPSLDLRLG L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11822KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.11e-55C2H2 family protein