PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 199aa MW: 21519.3 Da PI: 4.9892 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 112.3 | 2.7e-35 | 37 | 127 | 4 | 94 |
NF-YB 4 qdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 ++ lP+a v r+m+k lP +ak+++++ket+ ecv+efi+f+tsea+++cq e+r+t++g+dl+ al tlGf++y+ l++yl++ r+ + XP_027368613.1 37 ENPNLPLATVKRLMRKGLPLHAKVTEESKETMLECVTEFIGFITSEANHQCQLEHRRTVSGEDLIRALKTLGFNNYAVVLSLYLERLRQND 127 5778***********************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MEFITTMTVK DLQDGNGSGV NNQDLAVQAP AAEALQENPN LPLATVKRLM RKGLPLHAKV 60 TEESKETMLE CVTEFIGFIT SEANHQCQLE HRRTVSGEDL IRALKTLGFN NYAVVLSLYL 120 ERLRQNDAAA RFPSRVPPPP PPSFATGFPV IPAPFQTFPE TLEMGGFYNG GSGGFYNGVS 180 GGSGSGNATM ANFCYDPFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 4e-31 | NF-YB family protein |