PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368554.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 318aa    MW: 36354.9 Da    PI: 8.6281
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.5e-056789123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C +C+k F+++ +L  H+rtH
  XP_027368554.1 67 FMCFICKKDFPSRKSLCGHMRTH 89
                    89********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGFDEQNKPH EESHEASQKS VATASECEFC VQNCNSDTTS TDHKISHLQA QGKNLVTELN  60
PMSKDKFMCF ICKKDFPSRK SLCGHMRTHP DRNWRGVHPP IPSLPAHSHD SSSNLTMEKN  120
ENHYYSNAIA TPKKEEPVDL LKHLRMLPGW QFGKRRKKRV YRKEEITAAQ ILVDISHDTW  180
PHGVHLKSVL QMGHFGNNMK GASNDMNTRD EAGTGGVKDL VRDFGEMKMS KENNNENRRK  240
LTVKLKNPYS RVKDEAGDGY KCDICCRYYP TILDFVEDRL SHAKERNLKR KSSDGAREAD  300
QSSKKVHGFD LKELPEDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26940.13e-09C2H2 family protein