PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368470.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 480aa MW: 54309.7 Da PI: 10.0531

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.2	1.2e-17	117	204	1	94
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k +++s+v + +l lp kf+eeh k + +++lede+g ++e + +k+++ l++GW+ F+ +++L++gD +vF+l++ +f+l++ XP_027368470.1 117 FVKSMVRSHVYSCFWLGLPSKFCEEHLPK--TVYDMILEDENGSEYEAIY--IGKRCG--LSGGWRAFALDHKLDDGDALVFELIEAARFKLTF 204 89**********************533..4468***********..666666..9*********************9989998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MAKGRTNNKY EEARKQRLEE NKRRFEHHLR KLKSKINGVV EPRRSSRVRN PICSYHEDGS 60 INLPPLRKRS RSNSSSWGSY AARPLDEIKE ATKEERVCAL EAAEALQNNL KSSNPSFVKS 120 MVRSHVYSCF WLGLPSKFCE EHLPKTVYDM ILEDENGSEY EAIYIGKRCG LSGGWRAFAL 180 DHKLDDGDAL VFELIEAARF KLTFDDLNQF NGPPSLQPSQ QGATASCPTI YIVRAFSDSV 240 EEEEGKDILE EEGNMHATKT PKTASNRESR SNKTKKRKQA IVYETKESES AQERLPESRT 300 DKEVKPRGVN PTKKTKSKLS ATAESKGEAQ NKAEKPKASV KLSNKTRKSK EGKKNGFIQE 360 ADSKLEKVEP IEKGSKSVSQ KPIKKPAPKC NIEKFDGMIN FGLWQKQVKD VLIQSGLHKA 420 WKGKTSNTKE EKWEELDLRV ASAIRLCLAK NVLTNVQKMS TAKELWEKLE GLYQAKSISN

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MAKGRTNNKY EEARKQRLEE NKRRFEHHLR KLKSKINGVV EPRRSSRVRN PICSYHEDGS  60
INLPPLRKRS RSNSSSWGSY AARPLDEIKE ATKEERVCAL EAAEALQNNL KSSNPSFVKS  120
MVRSHVYSCF WLGLPSKFCE EHLPKTVYDM ILEDENGSEY EAIYIGKRCG LSGGWRAFAL  180
DHKLDDGDAL VFELIEAARF KLTFDDLNQF NGPPSLQPSQ QGATASCPTI YIVRAFSDSV  240
EEEEGKDILE EEGNMHATKT PKTASNRESR SNKTKKRKQA IVYETKESES AQERLPESRT  300
DKEVKPRGVN PTKKTKSKLS ATAESKGEAQ NKAEKPKASV KLSNKTRKSK EGKKNGFIQE  360
ADSKLEKVEP IEKGSKSVSQ KPIKKPAPKC NIEKFDGMIN FGLWQKQVKD VLIQSGLHKA  420
WKGKTSNTKE EKWEELDLRV ASAIRLCLAK NVLTNVQKMS TAKELWEKLE GLYQAKSISN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	275	316	KKRKQAIVYETKESESAQERLPESRTDKEVKPRGVNPTKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	5e-56	B3 family protein