PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 261aa MW: 29154.7 Da PI: 9.8185 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 6.9e-05 | 83 | 105 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F+++ L H++ H XP_027368408.1 83 FSCKFCNKKFPSSQALGGHQNAH 105 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSEQFVRDVE SKKLKHKIDE SPAMDAVDSE LLLSLSLGNN KGESSSKFTS KSLIAHEGSS 60 SSFAPKLVEN NNHQLFKPKQ RQFSCKFCNK KFPSSQALGG HQNAHRRERV LSRMDKEFEM 120 GTFGLGAHFC PYSTIAHQHH PLGGSPSLYH GTHMHPMPHM SWPHFVPSYG NQGLHKTSIP 180 RHQFGMTNPW GVPTKTPHAQ TSQNLYLRDV VDSQHNQVPS LDASNRATMA HSGIGNLLGN 240 QYTGNHQLTS SRSNCNNMQF Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25160.1 | 6e-12 | C2H2 family protein |