PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 281aa MW: 31892.4 Da PI: 6.404 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.2 | 9e-19 | 16 | 61 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg WT+ Ede+l+ +vkq+G +W++Ia+ ++ gRt+k+c++rw + XP_027368297.1 16 RGHWTPAEDEKLLLLVKQYGAQNWNSIAENLQ-GRTGKSCRLRWCNQ 61 899*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.2e-17 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eE+e+l+ a++ +G++ W+ Ia+ ++ gRt++ +k+ w+ XP_027368297.1 68 RNPFTEEEEERLLIAHHIYGNR-WAHIAKLFP-GRTDNAVKNQWHVT 112 789*******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MEDILAPGED TKTCPRGHWT PAEDEKLLLL VKQYGAQNWN SIAENLQGRT GKSCRLRWCN 60 QLDPRLNRNP FTEEEEERLL IAHHIYGNRW AHIAKLFPGR TDNAVKNQWH VTMSRKRREQ 120 SKKRSFDDLH RDSKGTKSHD PLVSSRVDLE NARSFDFNDL NSEENRFASL CPNGSLTFKF 180 GCMPSFANTL PLVYSIGKEG SDLFKYLSSQ SSEAFDGSTK FMTPKDNSVD DGRMKSECDD 240 SSATTKLNAS SILQEQADES SNFERKEVTF FDFLGVGVSS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 6e-54 | MYB family protein |