PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368224.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 437aa MW: 47510.3 Da PI: 9.2574

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.8e-05	166	188	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F+ ++L+ H+ + H XP_027368224.1 166 TCSQCGEVFPKMESLELHQAVrH 188 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MALLTSLPQH SDPKSKNKRK QQQQKKQQKQ KQPSSWDQIK NIITCKQIEG FRVHDPSKYS 60 KLGSSCSSIC SFRDVVHGNT RVVHRSDNSS PESSTLGQET GLLSRKPVTA TSSASSVSGS 120 AKSNGGATST SSTSRGMQFR KLSGCYECHM IIDPSRLPIS RSSVCTCSQC GEVFPKMESL 180 ELHQAVRHAV SELGPEDSGR NIVEIIFKSS WLKKDNPICK IERILKVHNT ERTIQRFEEC 240 RDTIKNRAQN SSKKNPRCAA DGNELLRFHC TTLTCALGAR GSSALCAAVP GCGVCTIIRH 300 GFQGKIGGEC KVKGVRTTAS SGRAHDSVVC GEGTRRAMLV CRVIAGRVKR VAEDALSDEE 360 NLSVASFDSV AGHAGIYSNL EELVVFNSRA ILPCFVVIYK VLSVLPCTRM THDPTMMMEG 420 GGGTQFDVNL VNILVTA

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MALLTSLPQH SDPKSKNKRK QQQQKKQQKQ KQPSSWDQIK NIITCKQIEG FRVHDPSKYS  60
KLGSSCSSIC SFRDVVHGNT RVVHRSDNSS PESSTLGQET GLLSRKPVTA TSSASSVSGS  120
AKSNGGATST SSTSRGMQFR KLSGCYECHM IIDPSRLPIS RSSVCTCSQC GEVFPKMESL  180
ELHQAVRHAV SELGPEDSGR NIVEIIFKSS WLKKDNPICK IERILKVHNT ERTIQRFEEC  240
RDTIKNRAQN SSKKNPRCAA DGNELLRFHC TTLTCALGAR GSSALCAAVP GCGVCTIIRH  300
GFQGKIGGEC KVKGVRTTAS SGRAHDSVVC GEGTRRAMLV CRVIAGRVKR VAEDALSDEE  360
NLSVASFDSV AGHAGIYSNL EELVVFNSRA ILPCFVVIYK VLSVLPCTRM THDPTMMMEG  420
GGGTQFDVNL VNILVTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-162	C2H2 family protein