PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027368157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 216aa MW: 24198.5 Da PI: 10.2888 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.9 | 8.7e-09 | 123 | 163 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L XP_027368157.1 123 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYLKFL 163 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MVMVMMMQHF PEANNSVTNF QPQEFSESTI THNNNTTSLP LANSINNTPS SIPWSSFTQH 60 SPSTTTSFSN ITPNSLTTEK PNLMREMIFR IAAMQPIKIE PEWVKAPKRR NVKISKDPQS 120 VAARHRRERI SERIRILQRL VPGGTKMDTA SMLDEAIHYL KFLKTQVQSL ERVAATNTGL 180 GFPVSFLSSG STVTTSTATN YEGSRVQSVE YFSDAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50330.1 | 2e-39 | bHLH family protein |