PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027367988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 143aa MW: 16015.2 Da PI: 6.7608 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.3 | 5.2e-15 | 23 | 64 | 3 | 48 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 y GVr ++ +gr++Ae r p++ + r++lg+f+taeeAa a++ XP_027367988.1 23 YLGVRKRP-WGRYAAEFRNPYT---KERHWLGTFDTAEEAAIAYDL 64 77******.*******999765...5******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MENLPPLIYK HPIRRTSRRS TMYLGVRKRP WGRYAAEFRN PYTKERHWLG TFDTAEEAAI 60 AYDLSSINIC GIDNARTNFH YPFASLPPPP LLIPPPPPPP PTPKLDPSVG LCPEIDAAYD 120 GDDESLIIAS ILQCFSNSGN CSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12890.1 | 4e-26 | ERF family protein |