PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367903.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 196aa    MW: 22397.4 Da    PI: 5.1049
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000213557123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ F++   L  H++ H
  XP_027367903.1 35 YECVFCKRGFTTAQALGGHMNIH 57
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEFVSYQDDS SKSSSEEIDR SSEQNDDMVG TGRSYECVFC KRGFTTAQAL GGHMNIHRKD  60
RANKAKPNFP PSSSSKVDEN SYADLGFYSA INPTHLAKGN YYSAAPDREV DTNYNYYHQI  120
YLPSHTCGAR PSHVQYSEVL CVENQREPEF LFGQDWRQRG LSLYTNPLCV HENKDKIENN  180
SEEDDLDLEL RLGHHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-16C2H2 family protein