PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367663.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 496aa MW: 53038.1 Da PI: 7.6514

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	134.7	8.1e-42	123	258	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 + k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_027367663.1 123 PPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksapht 217 5699****************************************************************999888899999886666677777888 PP TCP 89 ..........................kaaksaakskksqksaa 105 + s++++ +++++++ XP_027367663.1 218 fhgalalahhpyeeafqhpallgfhpH--HSQHHHPQQHHPQQ 258 888888888888766666666666432..22222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MELSDLQNNK KKQSSNTNNT NTNTNTGGTT HPHHHHHQQH SSSTSSHLVV PFDAIARPNP 60 TFIIPTSSPS SSSSSSSSSS SASATTLIDA SLAIATRSDH SPNNTQQLST TTAATAVTPV 120 ANPPKRSTKD RHTKVDGRGR RIRMPATCAA RVFQLTRELG HKSDGETIEW LLQQAEPAII 180 AATGTGTIPA NFSTLNVSLR SSGSTLSAPP SKSAPHTFHG ALALAHHPYE EAFQHPALLG 240 FHPHHSQHHH PQQHHPQQQL LSADQIADAL PSGGGDSSEN YMRKRYREDL FKDDNVNTQS 300 HNESGDASSP KAFKTTNLQQ LPKQQQQQQQ QQQPEGASSA SGLLRPTNLL PATAMWAVAP 360 AAASGGTPGS TIWMLPVTSG GGSSSGSASS ETQMWPFPQT GFMPRFNLPG GVEFQGGRGS 420 LQLGSMLMPQ QQQPSQHLGL AMSESNLGML AALNAYTRAG LNINSDNQQS LEHHHHHHHH 480 QPQPTESGED APNSSQ

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MELSDLQNNK KKQSSNTNNT NTNTNTGGTT HPHHHHHQQH SSSTSSHLVV PFDAIARPNP  60
TFIIPTSSPS SSSSSSSSSS SASATTLIDA SLAIATRSDH SPNNTQQLST TTAATAVTPV  120
ANPPKRSTKD RHTKVDGRGR RIRMPATCAA RVFQLTRELG HKSDGETIEW LLQQAEPAII  180
AATGTGTIPA NFSTLNVSLR SSGSTLSAPP SKSAPHTFHG ALALAHHPYE EAFQHPALLG  240
FHPHHSQHHH PQQHHPQQQL LSADQIADAL PSGGGDSSEN YMRKRYREDL FKDDNVNTQS  300
HNESGDASSP KAFKTTNLQQ LPKQQQQQQQ QQQPEGASSA SGLLRPTNLL PATAMWAVAP  360
AAASGGTPGS TIWMLPVTSG GGSSSGSASS ETQMWPFPQT GFMPRFNLPG GVEFQGGRGS  420
LQLGSMLMPQ QQQPSQHLGL AMSESNLGML AALNAYTRAG LNINSDNQQS LEHHHHHHHH  480
QPQPTESGED APNSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-62	TCP family protein