PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366856.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 264aa MW: 29343.1 Da PI: 8.4984

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	236	258	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ +L+ H + H XP_027366856.1 236 VCPKCSRGFRDPVSLVEHVERdH 258 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGTPEFPDLG KHCAVSDCKQ IDFLPFTCDR CNQVYCLEHR SYIRHQCTKA DKLDVTVVIC 60 PLCAKGVRLV PDQDPNITWE NHVNTECDPS NYEKVTKKKK CPVPGCREIL VFSNTIKCRD 120 CNVDHCLKHR FGPDHKCPGP KRLETSFSFM SLLNRSRKEE PKPNSSSTST SSKWTASFLN 180 AASNIRASAE AGMSKLSGEI NQAWQTSRDS AGQSRSNGQV HERGGNRSGA KVTIDVCPKC 240 SRGFRDPVSL VEHVERDHGG SSRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57480.1	1e-121	C2H2 family protein