PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366825.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 305aa MW: 34698.1 Da PI: 4.7727

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	249	281	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ XP_027366825.1 249 PYPTEEEKVQLSEMTGLDQKQINNWFINQRKRH 281 8*****************************885 PP
2	ELK	37.2	6.2e-13	201	222	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKY+gyL+sL++EF+ XP_027366825.1 201 ELKEMLLRKYGGYLSSLRKEFL 222 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEDIYKLNPL LSCSEDVVVR DHVNVNASAT AASELHLGLV ANNYLRMEEP SEPDVSDRLI 60 KTQIASHPLY PNLVSAYIEC QKVGAPPELA SLLEEIARES HPTDALREIG DDPELDEFME 120 SYCEVLHRYK QELSKPFNEA TLFLCSIESQ LSNLCKGTLT LSSDNNRSDE AAGTSEDELS 180 FEKVEAIEGH EFSGTRPGDQ ELKEMLLRKY GGYLSSLRKE FLKKRKKGKL PKDARIVLMD 240 WWNTHYRWPY PTEEEKVQLS EMTGLDQKQI NNWFINQRKR HWKPSEDMRF AIMDGVSGGG 300 IGGPM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	226	LRKEFLKKRK
2	223	227	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	4e-81	TALE family protein