PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366653.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 358aa MW: 41058.9 Da PI: 6.7406

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	102.5	2.3e-32	107	215	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k ltpsdv+k++rlv+pk++ae++ ++ + ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F+++ XP_027366653.1 107 FEKPLTPSDVGKLNRLVIPKQHAEKYfplaassgggDSGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERH 201 99****************************9977334447889********************************************99 PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 +++ +l+++++r+ XP_027366653.1 202 RNDAHRLFIGWRRR 215 999999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MSINHYSMDL PEATLWWTQQ EQQQQPTLME QTQNPPIHPS WPPQHQPKDP PFHYPTTTPR 60 FNLNNQNDNN DDDEEEDEDD TNTNTNTNDQ TTTTTPQETE HEKEPMFEKP LTPSDVGKLN 120 RLVIPKQHAE KYFPLAASSG GGDSGECKGL LLSFEDESGK CWRFRYSYWN SSQSYVLTKG 180 WSRYVKDKRL DAGDVVLFER HRNDAHRLFI GWRRRRQSDT APAHVSRAVG HAKNEVAAGV 240 GVGVGWTRGF YSAHPYPTHH HPLPYQHDCL HAGRGSQGQK QRTRPVENSS SSSSSSKVLR 300 LFGVNMECQP EHDSGPSTPQ CFYNMPSTQG TDNLNFYHHQ QPPSNPHPHM VRHQPYYY

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MSINHYSMDL PEATLWWTQQ EQQQQPTLME QTQNPPIHPS WPPQHQPKDP PFHYPTTTPR  60
FNLNNQNDNN DDDEEEDEDD TNTNTNTNDQ TTTTTPQETE HEKEPMFEKP LTPSDVGKLN  120
RLVIPKQHAE KYFPLAASSG GGDSGECKGL LLSFEDESGK CWRFRYSYWN SSQSYVLTKG  180
WSRYVKDKRL DAGDVVLFER HRNDAHRLFI GWRRRRQSDT APAHVSRAVG HAKNEVAAGV  240
GVGVGWTRGF YSAHPYPTHH HPLPYQHDCL HAGRGSQGQK QRTRPVENSS SSSSSSKVLR  300
LFGVNMECQP EHDSGPSTPQ CFYNMPSTQG TDNLNFYHHQ QPPSNPHPHM VRHQPYYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11580.2	2e-62	B3 family protein