PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366536.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 488aa MW: 53440.7 Da PI: 9.8356

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027366536.1 66 FICEVCNKGFQREQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	12.8	0.00036	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027366536.1 142 WKCEKCSKKYAVQSDWKAHSKTC 164 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MAAASSSTPF LGIREENSSQ ITHHQHSTIA PTTVPQKKRR NQPGTPNPDA EVIALSPKTL 60 MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS 120 RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 180 DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN 240 NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS 300 KQLQGLMQLP DFQVSDQVGS GFSSLFGANS IVQHENLSSP HMSATALLQK AAQMGSTTTP 360 NGSSLLRGVC SSSNNNGSKS ENGHHTTSLH GLMNSIANGG NTSMFGNENN LFHNVEESHN 420 KLPQNLNVSF GGSDKLTLDF LGVGGVVRNM SGGFSQREQQ RVMGTMSSSD PDLKSAQSTQ 480 HFGRSTLQ

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MAAASSSTPF LGIREENSSQ ITHHQHSTIA PTTVPQKKRR NQPGTPNPDA EVIALSPKTL  60
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS  120
RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  180
DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN  240
NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS  300
KQLQGLMQLP DFQVSDQVGS GFSSLFGANS IVQHENLSSP HMSATALLQK AAQMGSTTTP  360
NGSSLLRGVC SSSNNNGSKS ENGHHTTSLH GLMNSIANGG NTSMFGNENN LFHNVEESHN  420
KLPQNLNVSF GGSDKLTLDF LGVGGVVRNM SGGFSQREQQ RVMGTMSSSD PDLKSAQSTQ  480
HFGRSTLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-106	C2H2 family protein