PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366526.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 546aa MW: 59423 Da PI: 9.4428

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027366526.1 66 FICEVCNKGFQREQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	12.6	0.00041	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027366526.1 142 WKCEKCSKKYAVQSDWKAHSKTC 164 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MAAASSSTPF LGIREENSSQ ITHHQHSTIA PTTVPQKKRR NQPGTPNPDA EVIALSPKTL 60 MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS 120 RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 180 DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN 240 NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS 300 KQLQGLMQLP DFQGNTNNSD SSSVAAPSNL FNLSFFPNSN STGTIITDQF NNISGSDQGT 360 TTALYVNNNP AVSDQVGSGF SSLFGANSIV QHENLSSPHM SATALLQKAA QMGSTTTPNG 420 SSLLRGVCSS SNNNGSKSEN GHHTTSLHGL MNSIANGGNT SMFGNENNLF HNVEESHNKL 480 PQNLNVSFGG SDKLTLDFLG VGGVVRNMSG GFSQREQQRV MGTMSSSDPD LKSAQSTQHF 540 GRSTLQ

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MAAASSSTPF LGIREENSSQ ITHHQHSTIA PTTVPQKKRR NQPGTPNPDA EVIALSPKTL  60
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EPKRKVYLCP EPTCVHHDPS  120
RALGDLTGIK KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  180
DSFITHRAFC DALAQESARH PNGLNPLGTN LYGANHMSLG LSQVGTQLSQ LQNQNQTATN  240
NILRLGSVGG AAKFEHLIPP LNQSSFGHSP QSMPPSAFFI TDNTNQAFEE HQSHQGPFSS  300
KQLQGLMQLP DFQGNTNNSD SSSVAAPSNL FNLSFFPNSN STGTIITDQF NNISGSDQGT  360
TTALYVNNNP AVSDQVGSGF SSLFGANSIV QHENLSSPHM SATALLQKAA QMGSTTTPNG  420
SSLLRGVCSS SNNNGSKSEN GHHTTSLHGL MNSIANGGNT SMFGNENNLF HNVEESHNKL  480
PQNLNVSFGG SDKLTLDFLG VGGVVRNMSG GFSQREQQRV MGTMSSSDPD LKSAQSTQHF  540
GRSTLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-106	C2H2 family protein