PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366502.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 543aa MW: 62822 Da PI: 8.4073

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.9	2.6e-09	334	375	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE e l ++ +q+G++ Wk++a+ +g + + ++k+ w+ XP_027366502.1 334 KRKWTPEELEFLRKVQEQHGSD-WKSVAEALG--KHRFHVKDAWR 375 579*****************.******9..56677777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEEKTKKKRS KIDLSDLGSS FDLDSSKRKK KEPKEREKKH ATDKILKSNE SLEEDCTVEA 60 ADKQTCSVEG NVTLMCNEEE KSPENKSKKK KERKGVEVTN SNIADNQEVQ VLDVNQESKM 120 KKRKKIDYSL NGMQELIFSK PSKRSKMTED NELEGNEGED DDQGKKKKKK KKKKKLCEQS 180 KRKEHGEFNS NEGDSPLTRV ESRDDNAGFI DTDVDDQSKE MKIKKKVEAD TAESTNPGSS 240 KRKRVTFSDK VDVCCDGLVR GKRFTPKEDE KIKLAVYDYI ESHGLGDEGL DMILHCQSHP 300 EVKDCWKEIG AALPQRPMYS VYYRAHILFE RDEKRKWTPE ELEFLRKVQE QHGSDWKSVA 360 EALGKHRFHV KDAWRRIKLT NTNKGRWTQE EYQKLFDLVN LDLRARASDG YRKSKHGMLR 420 DNIGWEAIGD KLATRSSARC CKKWYEQLTS PMVASGAWSD TDDYRLISAL FTLDPCTMAE 480 VDWDNLLEHR PGDVCRKRWN QMVQFIGQHG GKPFGEQVEI LAKRFCPDLL EVREAFDEKP 540 LRC

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEEKTKKKRS KIDLSDLGSS FDLDSSKRKK KEPKEREKKH ATDKILKSNE SLEEDCTVEA  60
ADKQTCSVEG NVTLMCNEEE KSPENKSKKK KERKGVEVTN SNIADNQEVQ VLDVNQESKM  120
KKRKKIDYSL NGMQELIFSK PSKRSKMTED NELEGNEGED DDQGKKKKKK KKKKKLCEQS  180
KRKEHGEFNS NEGDSPLTRV ESRDDNAGFI DTDVDDQSKE MKIKKKVEAD TAESTNPGSS  240
KRKRVTFSDK VDVCCDGLVR GKRFTPKEDE KIKLAVYDYI ESHGLGDEGL DMILHCQSHP  300
EVKDCWKEIG AALPQRPMYS VYYRAHILFE RDEKRKWTPE ELEFLRKVQE QHGSDWKSVA  360
EALGKHRFHV KDAWRRIKLT NTNKGRWTQE EYQKLFDLVN LDLRARASDG YRKSKHGMLR  420
DNIGWEAIGD KLATRSSARC CKKWYEQLTS PMVASGAWSD TDDYRLISAL FTLDPCTMAE  480
VDWDNLLEHR PGDVCRKRWN QMVQFIGQHG GKPFGEQVEI LAKRFCPDLL EVREAFDEKP  540
LRC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	125	KKKKERKGVEVTNSNIADNQEVQVLDVNQESKMKKRKK
2	90	127	KKKKERKGVEVTNSNIADNQEVQVLDVNQESKMKKRKK
3	121	125	KKRKK
4	165	171	KKKKKKK
5	165	173	KKKKKKKKK
6	165	175	KKKKKKKKKKK
7	165	183	KKKKKKKKKKKLCEQSKRK
8	166	172	KKKKKKK
9	166	174	KKKKKKKKK
10	166	176	KKKKKKKKKKK
11	166	184	KKKKKKKKKKKLCEQSKRK
12	167	173	KKKKKKK
13	167	175	KKKKKKKKK
14	167	185	KKKKKKKKKKKLCEQSKRK
15	168	174	KKKKKKK
16	168	186	KKKKKKKKKKKLCEQSKRK
17	169	175	KKKKKKK
18	169	187	KKKKKKKKKKKLCEQSKRK
19	224	244	KKKVEADTAESTNPGSSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-119	MYB_related family protein