PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027366414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 726aa MW: 80091.9 Da PI: 6.1106 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.2 | 8.1e-20 | 62 | 117 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+ q+k+WFqN+R++ k XP_027366414.1 62 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQVK 117 688999**********************************************9877 PP | |||||||
2 | START | 208 | 3.7e-65 | 252 | 471 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 ela +a++el ++ala++p+Wv e +n+de+l++f+++ + ++ea r+s+vv+m++++lve+l+d++ qW++ + +a+tle XP_027366414.1 252 ELAVAAMEELTRMALAGDPLWVPGNhgtELLNEDEYLRIFPRGIGpkplgLKSEATRESVVVIMNHTNLVEILMDVN-QWSTVFCgivsRAMTLE 345 57899*****************99999999************999********************************.******99999****** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171 v+s+g galq+m+ae+q++splvp Rd +fvRy++q+++++w++vdvS+d+ ++ + R++++pSg+li++++ng+skvtwvehv+ XP_027366414.1 346 VLSTGvagnynGALQVMSAEFQVPSPLVPtRDNYFVRYCKQHSDESWAVVDVSLDHLRPSA----ISRSRRRPSGCLIQELPNGYSKVTWVEHVE 436 **********************************************************976....79**************************** PP --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++r + +l++ lv+sgla+ga++wva l+rqce+ XP_027366414.1 437 VDDRAVNSLYKLLVNSGLAFGARRWVASLDRQCER 471 *********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 726 aa Download sequence |
MYQTNVYDPH QNMIDMSSHK TSSDSELGRN RMGDDYEIRS GNEIMEAPPS GDDQDPNQRP 60 KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ RKELSRELGL EPLQIKFWFQ NKRTQVKAHQ 120 ERQENSILKS ENEKLRAENN RYKEALTNTT CPNCGGPAAL GEMSFDEQHL RIENARLREE 180 IDRMSGVAVK YGKPATSYYN LPSQNNMASR SLDLGVGNYG AQSGMVGEMY GGNDLLRTLP 240 VPTDSDKPMI VELAVAAMEE LTRMALAGDP LWVPGNHGTE LLNEDEYLRI FPRGIGPKPL 300 GLKSEATRES VVVIMNHTNL VEILMDVNQW STVFCGIVSR AMTLEVLSTG VAGNYNGALQ 360 VMSAEFQVPS PLVPTRDNYF VRYCKQHSDE SWAVVDVSLD HLRPSAISRS RRRPSGCLIQ 420 ELPNGYSKVT WVEHVEVDDR AVNSLYKLLV NSGLAFGARR WVASLDRQCE RLASAMATNI 480 PAGDLCVITS HEGRKSMLKL AERMIMSFCT GVGASTAHAW TALTTGCDDV RVMTRKSMDE 540 PGRPPGIVLS AATSLWLPVS SKRVFDFLRD ENSRREWDIL SNGGLVQEMA HIANGRDPGN 600 CVSLLRVNSP NSSQSNMLIL QESCTDSTGS YVVYAPVDIV AMNVVLSGGD PDYVALLPSG 660 FAILPDGPGL NNLGPILDVG SGGCLLTVAF QILVDSAPTA KLSVGSVTTV NSLIKCTVER 720 IKAAVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 0.0 | HD-ZIP family protein |