PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366305.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 481aa MW: 52027.6 Da PI: 7.6829

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.2	1.7e-39	86	237	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec....eae 76 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ + + + +a+ XP_027366305.1 86 SGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIRAAADAISELPSLnnpfpdtpkqlsdekrP---S-DQqgfdDAD 176 689***********************************************************88887777666653221...1.112455555 PP TCP 77 sssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmriknkl 136 + + ++n+s++ + +++a+s+ s++s+ s l+l++ e r kar+rarer +ek + k+++ XP_027366305.1 177 GDTNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRsENRVKARERARERAKEKEKEKESD 237 556666677777888999999999********9***************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MEENEIQAQA CKFPRVGNGR NESNKIGSGR GSDQYQDEEE DGELRRRGSG GGGGGGGGGG 60 GTDGSTNHFQ SGWHHSSRII RVSRASGGKD RHSKVMTSKG LRDRRVRLSV TTAIQFYDLQ 120 DRLGYDQPSK AVEWLIRAAA DAISELPSLN NPFPDTPKQL SDEKRPSDQQ GFDDADGDTN 180 YQQNQSQNLS LSKSACSSTS ETSKGSGLSL SRSENRVKAR ERARERAKEK EKEKESDSSI 240 AHHHHSVNHP MSHTASFTEL LTGRIGSTVT VPTTTSPNGS VHQIHGGDEG NLFNKGTTPM 300 ASTRQHWSST VTPMDYFSSG LLVGPSSSSR THHQSSSGFS GQIQLGHTLP ISPFSGDNNS 360 DQMQHFSFMP EHLIPAAVTS SHPSGSDYNL NFTISSGLAG YNRGTLQSNS PSLLPHQRFQ 420 PIDGSSNLPF FIGAPAPASA PPTMDNNNHH HLQFSPVFDG RLQLCYGDGN RHSDHKGKAK 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MEENEIQAQA CKFPRVGNGR NESNKIGSGR GSDQYQDEEE DGELRRRGSG GGGGGGGGGG  60
GTDGSTNHFQ SGWHHSSRII RVSRASGGKD RHSKVMTSKG LRDRRVRLSV TTAIQFYDLQ  120
DRLGYDQPSK AVEWLIRAAA DAISELPSLN NPFPDTPKQL SDEKRPSDQQ GFDDADGDTN  180
YQQNQSQNLS LSKSACSSTS ETSKGSGLSL SRSENRVKAR ERARERAKEK EKEKESDSSI  240
AHHHHSVNHP MSHTASFTEL LTGRIGSTVT VPTTTSPNGS VHQIHGGDEG NLFNKGTTPM  300
ASTRQHWSST VTPMDYFSSG LLVGPSSSSR THHQSSSGFS GQIQLGHTLP ISPFSGDNNS  360
DQMQHFSFMP EHLIPAAVTS SHPSGSDYNL NFTISSGLAG YNRGTLQSNS PSLLPHQRFQ  420
PIDGSSNLPF FIGAPAPASA PPTMDNNNHH HLQFSPVFDG RLQLCYGDGN RHSDHKGKAK  480
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	9e-43	TCP family protein