PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027366226.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 587aa    MW: 67172.5 Da    PI: 7.0638
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027366226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix445.8e-14100164270
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 
                     W ++ev+aL+++r++me+++ +       We+vs+k++e g+ +rs+++Ckek+e+ ++++ +i+  +++
  XP_027366226.1 100 WNNDEVHALLRIRSSMESWFPEL-----TWEHVSRKLAELGYnKRSAEKCKEKFEEESRYFNNINFAKNN 164
                     ********************987.....9*************778****************999876665 PP
2trihelix957.2e-30437524186
        trihelix   1 rWtkqevlaLiearremeerlr.rgk..lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+k+evlaLi++r +  ++ + ++k   k+plWe++s+ m+e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql 
  XP_027366226.1 437 RWPKDEVLALINLRCNSVNNNNnEDKegNKAPLWERISQGMSELGYKRSAKRCKEKWENINKYFRKTKDANKKR-SLDSRTCPYFHQLS 524
                     8*************8655555514334499*******************************************8.9999********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MFDGVPDQFH QFITPRTSLP LHLPFPLHAS GTPNTTFPTN FDPYNPPHQL PLQPNLLHPL  60
HHHTSSTHKD EEKEENTTVS MNFEIQRDPR QQLPELIDPW NNDEVHALLR IRSSMESWFP  120
ELTWEHVSRK LAELGYNKRS AEKCKEKFEE ESRYFNNINF AKNNNYRFLS ELEQLYHQGE  180
GGDHHQGGTQ DKTHQLQKQD KMGHHALEQE APRNVESTLA KQSEEVVVDK TKERKRKRPD  240
RFEMFKGFCE SIVHKMMAQQ EEMHNKLLQD MMRRDEEKFT KEEAWKKQEM DKMNKELEMM  300
AREQAIAGDR QANIIEILKK FSASSPASQS LKVTNGSNPV TQNPNPSSTM ILNHLNTDTS  360
PSQNNPALPT TENPSSSLAH DTLQVISSSN TSAQAPQNPS SSSLNSQNNN PLEKNSVLNR  420
ASSNFVSTNE KDDVGRRWPK DEVLALINLR CNSVNNNNNE DKEGNKAPLW ERISQGMSEL  480
GYKRSAKRCK EKWENINKYF RKTKDANKKR SLDSRTCPYF HQLSNLYNQG KLVLQSERSE  540
SHLTPQGNSD QVPQDQTQIA ESSSQVGSAA AGFSVQQVDH GGKTLTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-67Trihelix family protein