PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027366224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GeBP | ||||||||
Protein Properties | Length: 394aa MW: 43966.4 Da PI: 4.5158 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 117.8 | 5.9e-37 | 106 | 201 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG+++++a++g+s ++d+ fy+++k+++++ ++k+qlveK+rrLKkK+++ +k+ sgk++sf+++hdq +fe+s +iW XP_027366224.1 106 LFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLTKITSGKDFSFKSPHDQATFEISCRIW 200 79********************************************************************************************* PP DUF573 97 g 97 XP_027366224.1 201 S 201 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MASHQNDAVF PEEDLDDDDE TLEDEEEEDE DDDVLCEPDE DDETEPSPST SSALAVVALA 60 APGSAVSEAD NVTIPTATIA VADSSPKRQR TEQIEEKKAL DDSRRLFQRL WTDEDEIGLL 120 QGFLEYTAQR GSSHHNDTAL FYDQIKSKLQ LGFNKNQLVE KLRRLKKKYR NVLTKITSGK 180 DFSFKSPHDQ ATFEISCRIW SNTGPITGPV EDDDEINLNP NPNPNFSHSM KSESMNEKRT 240 ASSRKRSRSR SEKRDMNDGS ALHKDNNCNS NNNNNNNNNK DNENCNGRHT LQGLIEETVR 300 GCLSPVLKEL LVSGGMGFRN PFGFGGRGGF ALNPMPMPMP MPLSLLNLGI GEIGGDDNWR 360 KQQILELEVY SKRLELVQHE IKVALEELRS AGGG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 245 | 250 | KRSRSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 3e-69 | GeBP family protein |