PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366218.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 512aa MW: 55018.8 Da PI: 9.7976

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027366218.1 64 FICEICNKGFQRDQNLQLHRRGH 86 89*******************88 PP
2	zf-C2H2	13.9	0.00016	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_027366218.1 140 WKCEKCSKKYAVQSDWKAHTKTC 162 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MQMMPGDPFS LSTSIGGFTQ EQNTNPNPKP NPPPKKKRNL PGTPDPDAEV IALSPKTLMA 60 TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLRQRSNKEV RKKVYICPEK TCVHHDPARA 120 LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHTK TCGTREYKCD CGTLFSRKDS 180 FITHRAFCDA LAEESARLTS VATTNLNFKS EEGSQHGLGH GLIGAQGLQN VVGIPQFGPH 240 GFRLDFNGMS AEQQRPSLSL WLNQGNPHMN TGNNTNPSDV GPNYMSSCSS SGLPEIVQMA 300 QANALMGSSS IVSNFGVPAA SNSTSANLSL SSLPIGKRGE AGGTVVDLAS IYSEGQNKQS 360 KPASPMSATA LLQKAAQMGS TRSTNPSIFS GSFGVMNSPS SQTTSLNNNN NNGSAGAAMM 420 LGSSTSTNTN EFSSLTHSSN GFDQLVMQTN GHLQSTEPVK LKLHSNAVEH NLTRDFLGVS 480 GGGAAAQFLP QELAKFASIG SPMGLSQFTS NQ

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MQMMPGDPFS LSTSIGGFTQ EQNTNPNPKP NPPPKKKRNL PGTPDPDAEV IALSPKTLMA  60
TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLRQRSNKEV RKKVYICPEK TCVHHDPARA  120
LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VQSDWKAHTK TCGTREYKCD CGTLFSRKDS  180
FITHRAFCDA LAEESARLTS VATTNLNFKS EEGSQHGLGH GLIGAQGLQN VVGIPQFGPH  240
GFRLDFNGMS AEQQRPSLSL WLNQGNPHMN TGNNTNPSDV GPNYMSSCSS SGLPEIVQMA  300
QANALMGSSS IVSNFGVPAA SNSTSANLSL SSLPIGKRGE AGGTVVDLAS IYSEGQNKQS  360
KPASPMSATA LLQKAAQMGS TRSTNPSIFS GSFGVMNSPS SQTTSLNNNN NNGSAGAAMM  420
LGSSTSTNTN EFSSLTHSSN GFDQLVMQTN GHLQSTEPVK LKLHSNAVEH NLTRDFLGVS  480
GGGAAAQFLP QELAKFASIG SPMGLSQFTS NQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	103	KLRQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-106	C2H2 family protein