PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027365832.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 243aa    MW: 25489.3 Da    PI: 10.0999
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027365832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-063659225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k ++C  f+ t  C++G++C+F H
  XP_027365832.1 36 KSKPCTKFFSTAGCPFGESCHFLH 59
                    7789******************** PP
2zf-CCCH36.11.1e-11210234126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     +kt+lC +fa+ G C +G+rC+FaHg
  XP_027365832.1 210 FKTKLCENFAK-GSCTFGERCHFAHG 234
                     69*********.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDFRKRGRPE AAVNLNGTVK KTKLEMESLS TGVGSKSKPC TKFFSTAGCP FGESCHFLHY  60
VPGGYNAVAQ MMNLKPVAPP PSRNIAAPPP VPNGSALRMS GRVEAPPGLA ASFGANSTAK  120
ISVEASLAGA IIGKGGVNSK QICRQTGAKL SIREHESDPN LRNIELEGSF EQIKEASNMV  180
KELLLTISMS APPKSTPGIP GAPAPPGSNF KTKLCENFAK GSCTFGERCH FAHGAAELRK  240
PGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.11e-100C3H family protein