PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365730.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 420aa MW: 46885.6 Da PI: 9.2292

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	60	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_027365730.1 60 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 119 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MASSSSDPGK SEAGGGTETS EAAMPNDEQL RLKKAKKERV CTAKERISKM PPCVAGKRSS 60 IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DDEEAAARAY DLAALKYWGP 120 SALINFPVTD YARDLEEMQN VSREEYLASL RRKSSGFSRG LSKYRGLSSR WEPKYGRMAG 180 FDYVNSIYCG NAGEDSAAET KYISSFCIER KIDLTSYIKW WASYKSRQPD SAARFSDVKK 240 HGFAGDICCE LKTLEQKFHT SEPYQLPELG MPCKGRKQKH SSVSSLSILS QSAAYKNLQE 300 KAAKRQDRSK DNDENENKHT INKLDHGRAA EKSSNNDGGN ETLEIAMGMS GSLPLQRNVY 360 PLTQLLSAPL LTAYSTVDPL VDPVLWTPLV PILPAGLSPV AEVTKTESSS TYTIFSQRSD

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MASSSSDPGK SEAGGGTETS EAAMPNDEQL RLKKAKKERV CTAKERISKM PPCVAGKRSS  60
IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DDEEAAARAY DLAALKYWGP  120
SALINFPVTD YARDLEEMQN VSREEYLASL RRKSSGFSRG LSKYRGLSSR WEPKYGRMAG  180
FDYVNSIYCG NAGEDSAAET KYISSFCIER KIDLTSYIKW WASYKSRQPD SAARFSDVKK  240
HGFAGDICCE LKTLEQKFHT SEPYQLPELG MPCKGRKQKH SSVSSLSILS QSAAYKNLQE  300
KAAKRQDRSK DNDENENKHT INKLDHGRAA EKSSNNDGGN ETLEIAMGMS GSLPLQRNVY  360
PLTQLLSAPL LTAYSTVDPL VDPVLWTPLV PILPAGLSPV AEVTKTESSS TYTIFSQRSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-147	AP2 family protein