PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365729.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 417aa MW: 46643.4 Da PI: 9.2292

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.2	3.7e-17	60	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_027365729.1 60 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 119 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MASSSSDPGK SEAGGGTETS EAAMPNDEQL RLKKAKKERV CTAKERISKM PPCVAGKRSS 60 IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DDEEAAARAY DLAALKYWGP 120 SALINFPVTD YARDLEEMQN VSREEYLASL RRKSSGFSRG LSKYRGLSSR WEPKYGRMAG 180 FDYVNSIYCG EDSAAETKYI SSFCIERKID LTSYIKWWAS YKSRQPDSAA RFSDVKKHGF 240 AGDICCELKT LEQKFHTSEP YQLPELGMPC KGRKQKHSSV SSLSILSQSA AYKNLQEKAA 300 KRQDRSKDND ENENKHTINK LDHGRAAEKS SNNDGGNETL EIAMGMSGSL PLQRNVYPLT 360 QLLSAPLLTA YSTVDPLVDP VLWTPLVPIL PAGLSPVAEV TKTESSSTYT IFSQRSD

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MASSSSDPGK SEAGGGTETS EAAMPNDEQL RLKKAKKERV CTAKERISKM PPCVAGKRSS  60
IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DDEEAAARAY DLAALKYWGP  120
SALINFPVTD YARDLEEMQN VSREEYLASL RRKSSGFSRG LSKYRGLSSR WEPKYGRMAG  180
FDYVNSIYCG EDSAAETKYI SSFCIERKID LTSYIKWWAS YKSRQPDSAA RFSDVKKHGF  240
AGDICCELKT LEQKFHTSEP YQLPELGMPC KGRKQKHSSV SSLSILSQSA AYKNLQEKAA  300
KRQDRSKDND ENENKHTINK LDHGRAAEKS SNNDGGNETL EIAMGMSGSL PLQRNVYPLT  360
QLLSAPLLTA YSTVDPLVDP VLWTPLVPIL PAGLSPVAEV TKTESSSTYT IFSQRSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-146	AP2 family protein