PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365637.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 695aa MW: 76049.2 Da PI: 6.4608

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	22.3	2.3e-07	276	296	5	26
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C++f++ G C++Gd C +aHg XP_027365637.1 276 PCPDFRK-GACRRGDMCEYAHG 296 8****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MMNRLTIETE DSFASLLELA ANNNVEGFKR MIERDPSCVD EVGLWYSHRK GSRQMVNELR 60 TPLMVAATYG SIDVIKLILS LSGCDINKPC GLDKSTALHC AASGGAENAV EVVKLLLAAG 120 ADQNSVDGNG HHPIDVIVVP PKLASLKNNL EELLQIDDSI AVCNLRVTTA PSNTYSPPLS 180 ASPENGSPSA PDLLLKLKLN DGHVSSASEK KEYPVDPSLP DIKNSIYSTD EFRMYSFKVR 240 PCSRAYSHDW TECPFVHPGE NARRRDPRKY HYSCVPCPDF RKGACRRGDM CEYAHGVFEC 300 WLHPAQYRTR LCKDGTSCSR RVCFFAHTVE ELRPLYVSTG SAVPSPRSST SSAMDFAAAM 360 SMLPGSPSSM SVMSPSPFTP PMSPSANGMQ HSSVAWSQQN VPALHLPGSS LHSSRLRSSL 420 NARDIPLDDF DLLPEYDVQQ QQLLNELSYL SQQSNTINRS GRLTPSNLDD IFSSESSSPR 480 FSDPALASAV YSPTHKSAVL NQFQQQQSLL SPVSTNFSSK NVDNPLLQAS FGVQTSGRMS 540 PRNVEPLSPM SSRISVLAQR EKQLQFRSLS SRELGSNSTT VAAATGSPIN SWSKWGPSNG 600 TLDWAVNSDQ LGKLRRSSSF EFGNNEEEPD LSWVQSLVKE SPSEVKENLA VSNVEAAGSS 660 GEVSNTRAQM ETVDHAVLRA RLEQMKLDHL VAQQN

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MMNRLTIETE DSFASLLELA ANNNVEGFKR MIERDPSCVD EVGLWYSHRK GSRQMVNELR  60
TPLMVAATYG SIDVIKLILS LSGCDINKPC GLDKSTALHC AASGGAENAV EVVKLLLAAG  120
ADQNSVDGNG HHPIDVIVVP PKLASLKNNL EELLQIDDSI AVCNLRVTTA PSNTYSPPLS  180
ASPENGSPSA PDLLLKLKLN DGHVSSASEK KEYPVDPSLP DIKNSIYSTD EFRMYSFKVR  240
PCSRAYSHDW TECPFVHPGE NARRRDPRKY HYSCVPCPDF RKGACRRGDM CEYAHGVFEC  300
WLHPAQYRTR LCKDGTSCSR RVCFFAHTVE ELRPLYVSTG SAVPSPRSST SSAMDFAAAM  360
SMLPGSPSSM SVMSPSPFTP PMSPSANGMQ HSSVAWSQQN VPALHLPGSS LHSSRLRSSL  420
NARDIPLDDF DLLPEYDVQQ QQLLNELSYL SQQSNTINRS GRLTPSNLDD IFSSESSSPR  480
FSDPALASAV YSPTHKSAVL NQFQQQQSLL SPVSTNFSSK NVDNPLLQAS FGVQTSGRMS  540
PRNVEPLSPM SSRISVLAQR EKQLQFRSLS SRELGSNSTT VAAATGSPIN SWSKWGPSNG  600
TLDWAVNSDQ LGKLRRSSSF EFGNNEEEPD LSWVQSLVKE SPSEVKENLA VSNVEAAGSS  660
GEVSNTRAQM ETVDHAVLRA RLEQMKLDHL VAQQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41900.1	0.0	C3H family protein