PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365487.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 577aa MW: 62152.3 Da PI: 9.6266

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_027365487.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	11.9	0.0007	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027365487.1 147 WKCDKCSKKYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MAASSSSASL FGFREEDQNQ MKQQHSLTPT SSATPAAPPP PKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEPKKK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARQPPNLG GAISGHNLYG SNNMALNLSQ VGPNMQDQNN 240 QPNELLRLGG GAGRTGQFDH IIGSPFRSSQ QPFFMPEPNQ NYHHHPEQQQ CLVQNKPFQG 300 LMQLSDLNNN HHHNNSVNNS PSAGSTLFNL PFLSSNTTNT TNTSFSEHFN NATNNGNAGG 360 NNEGTNFFTT SSAPSLFSTS LQGGSNNNNN NNSAISHMSA TALLQKAAQM GATSSNSTAS 420 LLKSFGSGSS SSGGSKSDHR PLVAAANYGG IFGGSEHSSN SNLQDLMNSF AVSGNSSLFE 480 SGSSGGFSVT GFEAYDHNNR DPKLHPMNIG GSDRLTRDFL GVGQIVRSMS GGGGGGVSVS 540 HREQHQQRGF NLSSMEAERN NAAASGQSFG GGGGNFQ

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MAASSSSASL FGFREEDQNQ MKQQHSLTPT SSATPAAPPP PKKKRNQPGT PNPDAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEPKKK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCD KCSKKYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARQPPNLG GAISGHNLYG SNNMALNLSQ VGPNMQDQNN  240
QPNELLRLGG GAGRTGQFDH IIGSPFRSSQ QPFFMPEPNQ NYHHHPEQQQ CLVQNKPFQG  300
LMQLSDLNNN HHHNNSVNNS PSAGSTLFNL PFLSSNTTNT TNTSFSEHFN NATNNGNAGG  360
NNEGTNFFTT SSAPSLFSTS LQGGSNNNNN NNSAISHMSA TALLQKAAQM GATSSNSTAS  420
LLKSFGSGSS SSGGSKSDHR PLVAAANYGG IFGGSEHSSN SNLQDLMNSF AVSGNSSLFE  480
SGSSGGFSVT GFEAYDHNNR DPKLHPMNIG GSDRLTRDFL GVGQIVRSMS GGGGGGVSVS  540
HREQHQQRGF NLSSMEAERN NAAASGQSFG GGGGNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	5e-93	C2H2 family protein