PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027365467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 483aa MW: 52789.3 Da PI: 6.5986 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 59.9 | 6.6e-19 | 103 | 189 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ ++l+rg+l++ +We+v++++ r + ++s +qCk+k +nl+kryk ++++++++ + s+s +p+f+qle XP_027365467.1 103 EWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEDVAAVVseRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSG-CISTSPWPWFKQLE 189 5*************************************666677899*************************9.99999********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MASCDDDDDF SLLRDDNHPL HHQPYAPHHH FSPSAVAVAS VPPKPVANDA EDYGNPFDDD 60 GGSEKRKECE EIGDGTTSYG FNKRSKAPPS STAGAEYRKD REEWSDTAIV CLLEAYTEKF 120 TQLNRGNLRG RDWEDVAAVV SERCENQSKS VEQCKNKVDN LKKRYKLERH RMSSGCISTS 180 PWPWFKQLEQ IVGNSLPAKF ADEDKAVVSA GTSPRQSKRY GVATPSSGGQ ANNMKSKALS 240 NLRWRRVVLK ISGAALTASD TCNIDPKVAM LVSREVAKAS RLGVEVAIVV GGRNFFCGDA 300 WVTATGLERC TAYQVGMMAT VMNSILLQST LEKMGVQTRV QTSVAMQEFA EPYNRQRAIR 360 HLEKGRVVIF GGIGFGTGNP LFSTDIAAAL RASELNAEAV LKGTNVDGVY DRNSRDNNFT 420 FEHISFRELG SRGVTAMDVS ALTFCEENAI PVVVFNLLEP GNISKALCGE QVGTLIDQTG 480 AIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 0.0 | Trihelix family protein |