PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364844.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family RAV
Protein Properties Length: 308aa    MW: 35137.7 Da    PI: 8.0985
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.12.5e-092975254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                    ++kGV    ++g W A+I+       + +r++lg+f +++eAa a++ a  kl+
  XP_027364844.1 29 KFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFKSENEAAMAYDSASIKLR 75
                    789996.566899****999......44*********************99997 PP
2B3825.7e-26151252184
                     EEEE-..-HHHHTT-EE--HHH.HTT..................---.....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..................ggkke...esktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 
                     f+k+ltpsdv+k++rlv+pkk+a ++                  g       ++ +++++d+  r W+++++y+k+s++yv+t+GW++Fvk+++L
  XP_027364844.1 151 FQKELTPSDVGKLNRLVIPKKHAVTYfpyvcgsaeandemdghgG---GcvdNDNEVVFYDKLMRLWKFRYCYWKSSQSYVFTRGWNRFVKDKKL 242
                     99*****************************88877766666653...04447789*************************************** PP

                     -TT-EEEEEE CS
              B3  75 kegDfvvFkl 84 
                     k++D++ F++
  XP_027364844.1 243 KAKDIIAFYV 252
                     ********94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MISNSDCGDH NIVTFDAVKR ARHEGSCQKF KGVVPQQNGH WGAQIYANHQ RIWLGTFKSE  60
NEAAMAYDSA SIKLRSGESH RNFPWNDQAV KEPQFQSHYS AETVLTMIRD GTYPSKFAAF  120
LRTHQTGGVG INVKHLCLKD EEERFSCTQL FQKELTPSDV GKLNRLVIPK KHAVTYFPYV  180
CGSAEANDEM DGHGGGCVDN DNEVVFYDKL MRLWKFRYCY WKSSQSYVFT RGWNRFVKDK  240
KLKAKDIIAF YVCEPINGRR EGEGQVFTLI DVIYNADEIR QCSGDEEAKD TKDLNAPKGL  300
RLFGVCIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.15e-97RAV family protein