PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364811.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family B3
Protein Properties Length: 478aa    MW: 55712.2 Da    PI: 9.5042
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.2e-1413101599
                     -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      + +d+l++g +++p++f++++ +   e s  ++l  ++g +Wevk   ++ +  ++l++ Wk+F +   L+e+  +vF+++g+s+f  +v +++
  XP_027364811.1  13 KIEEDNLRNGHMRIPRSFVNKCwE---EISNPIVLLLPNGAKWEVKW--KRPDVDVWLSNDWKKFSEFYALDENHLLVFRYVGKSRF--HVVILD 100
                     4579****************9953...34567***************..999999****************************9999..888887 PP

                     S CS
              B3  99 k 99 
                     +
  XP_027364811.1 101 Q 101
                     6 PP
2B366.34.4e-21226310188
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+ ++ ps+v k   lv+p +f+++ +  +e++  +tl  ++ rsW vk++ +++ +++++t+GW +Fvk+n+Lk gD++vF+ + + 
  XP_027364811.1 226 FIREMHPSYVQKYF-LVIPGHFIKSSQ--PEGDDSVTLCVSEERSWGVKFKTNRNNEQVMFTTGWMNFVKDNNLKIGDVCVFEETMSV 310
                     66677788888887.********8875..5577789***************9*******************************33223 PP
3B3437.9e-143904731096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +++ + +++p +f+++  +++ +  ++tl+    rsW vkl+y    +     ++ GW++Fv++ +Lk+gD++ F+l+++++  l+vk+
  XP_027364811.1 390 STQMKYMYIPVNFIRKLAIDNVN--EVTLQV-GKRSWLVKLKYypMHNY--GRFSLGWSSFVRECHLKAGDVCFFELIDKRKNVLKVKI 473
                     4455679**********888666..566554.77*******99553333..447789*********************88777788877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MSSHGNDIHF YKKIEEDNLR NGHMRIPRSF VNKCWEEISN PIVLLLPNGA KWEVKWKRPD  60
VDVWLSNDWK KFSEFYALDE NHLLVFRYVG KSRFHVVILD QSALEIKYPL LEEATFDDEK  120
GDNSSRHNKR QKSPLAFSSF TKKIKTNPTK EPQCYHSQDV ETKHAQSRMN SRPKNKGGDV  180
GGRRYIYANR SSSKFKAPQR EESLEDTDGS SAWERANAFH SENPFFIREM HPSYVQKYFL  240
VIPGHFIKSS QPEGDDSVTL CVSEERSWGV KFKTNRNNEQ VMFTTGWMNF VKDNNLKIGD  300
VCVFEETMSV GISFRVVIFR DREESSPPLL QAHGDGAKQR KRTRFQNSFT KRGCEGIPRE  360
DSRANVIDDS EFPTCNNKMW ENQLALTIKS TQMKYMYIPV NFIRKLAIDN VNEVTLQVGK  420
RSWLVKLKYY PMHNYGRFSL GWSSFVRECH LKAGDVCFFE LIDKRKNVLK VKISGCID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-28B3 family protein