PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027364600.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 180aa    MW: 20781 Da    PI: 5.9406
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027364600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000143355123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H++ H
  XP_027364600.1 33 YECTFCKRGFTNAQALGGHMNIH 55
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MNSEKPLSSE ILSEETDQQE EAQYDNEGTK RSYECTFCKR GFTNAQALGG HMNIHRRDRA  60
KAKQVVPNSS LPLINKFNND ESMTFPFASE IPNQPTRLYS ILESQRNCDV YFHPPPPSHT  120
FQYEFYNPRS RPMSLNQELR GANLSLQIGP SHVDDIHQVR RGNQKDSEVD LELRLGYDPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15664RRDRAKAKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.19e-17C2H2 family protein