PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364465.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-YC

Protein Properties

Length: 225aa MW: 24638.5 Da PI: 4.9909

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.4	1.4e-55	45	149	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q i++++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl XP_027364465.1 45 QLQMFWSYQrqeIDHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 139 89***9988899***************************************************************************** PP NF-YC 93 vdivprdelk 102 vdivprd++k XP_027364465.1 140 VDIVPRDDIK 149 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MDSNQQGTQP QTQNQTQGGG YQGGAGTPGT GAPSFQHLLH QQQQQLQMFW SYQRQEIDHV 60 NDFKNHQLPL ARIKKIMKAD EDVRMISAEA PILFAKACEL FILELTIRSW LHAEENKRRT 120 LQKNDIAAAI TRTDIFDFLV DIVPRDDIKD DAALVAATAS GVPYYYPPIG QPAGIMIGRP 180 AVDPATGVYV QPPSQAWQSV WQSAAEDASY ATGGSGAQGN LDGQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	124	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-102	NF-YC family protein